Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sdc2P43407 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sdc2P43407 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sdc2P43407 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sdc2P43407 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.9■□□□□ 0.46
Sdc2P43407 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sdc2P43407 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sdc2P43407 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Sdc2P43407 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sdc2P43407 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.9■□□□□ 0.46
Sdc2P43407 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sdc2P43407 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.9■□□□□ 0.46
Sdc2P43407 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sdc2P43407 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Sdc2P43407 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Sdc2P43407 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Sdc2P43407 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Sdc2P43407 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Sdc2P43407 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc2P43407 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc2P43407 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc2P43407 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc2P43407 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc2P43407 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc2P43407 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc2P43407 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc2P43407 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc2P43407 Gm10052-201ENSMUST00000168019 960 ntBASIC17.89■□□□□ 0.45
Sdc2P43407 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.89■□□□□ 0.45
Sdc2P43407 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc2P43407 Gm7729-201ENSMUST00000050143 801 ntBASIC17.89■□□□□ 0.45
Sdc2P43407 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Sdc2P43407 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc2P43407 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc2P43407 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc2P43407 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc2P43407 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc2P43407 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.89■□□□□ 0.45
Sdc2P43407 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc2P43407 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc2P43407 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc2P43407 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc2P43407 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
Sdc2P43407 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc2P43407 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc2P43407 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
Sdc2P43407 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
Sdc2P43407 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdc2P43407 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdc2P43407 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Sdc2P43407 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdc2P43407 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdc2P43407 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdc2P43407 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.88■□□□□ 0.45
Sdc2P43407 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdc2P43407 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdc2P43407 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Sdc2P43407 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdc2P43407 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Sdc2P43407 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Sdc2P43407 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Sdc2P43407 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Sdc2P43407 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdc2P43407 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdc2P43407 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdc2P43407 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdc2P43407 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Sdc2P43407 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.88■□□□□ 0.45
Sdc2P43407 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sdc2P43407 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sdc2P43407 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sdc2P43407 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sdc2P43407 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.87■□□□□ 0.45
Sdc2P43407 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Sdc2P43407 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sdc2P43407 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sdc2P43407 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sdc2P43407 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.87■□□□□ 0.45
Sdc2P43407 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.87■□□□□ 0.45
Sdc2P43407 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sdc2P43407 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.87■□□□□ 0.45
Sdc2P43407 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Sdc2P43407 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.87■□□□□ 0.45
Sdc2P43407 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.87■□□□□ 0.45
Sdc2P43407 Gm44430-201ENSMUST00000203376 995 ntBASIC17.87■□□□□ 0.45
Sdc2P43407 Gm18032-201ENSMUST00000222541 538 ntBASIC17.87■□□□□ 0.45
Sdc2P43407 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.87■□□□□ 0.45
Sdc2P43407 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sdc2P43407 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.87■□□□□ 0.45
Sdc2P43407 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sdc2P43407 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sdc2P43407 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Sdc2P43407 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.87■□□□□ 0.45
Sdc2P43407 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sdc2P43407 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sdc2P43407 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sdc2P43407 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sdc2P43407 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sdc2P43407 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sdc2P43407 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms