Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-2P42586 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-2P42586 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-2P42586 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-2P42586 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-2P42586 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-2P42586 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-2P42586 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Nkx2-2P42586 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-2P42586 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.6□□□□□ -0.07
Nkx2-2P42586 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-2P42586 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.6□□□□□ -0.07
Nkx2-2P42586 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-2P42586 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-2P42586 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-2P42586 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
Nkx2-2P42586 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Nkx2-2P42586 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-2P42586 Gm9172-201ENSMUST00000212092 954 ntBASIC14.6□□□□□ -0.07
Nkx2-2P42586 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-2P42586 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-2P42586 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-2P42586 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-2P42586 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-2P42586 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-2P42586 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-2P42586 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-2P42586 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Nkx2-2P42586 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-2P42586 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-2P42586 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-2P42586 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-2P42586 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.6□□□□□ -0.07
Nkx2-2P42586 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-2P42586 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-2P42586 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Nkx2-2P42586 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-2P42586 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-2P42586 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-2P42586 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-2P42586 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-2P42586 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-2P42586 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-2P42586 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Nkx2-2P42586 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-2P42586 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-2P42586 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Nkx2-2P42586 Ank2-226ENSMUST00000189368 339 ntBASIC14.59□□□□□ -0.07
Nkx2-2P42586 Gm7367-201ENSMUST00000057611 492 ntBASIC14.59□□□□□ -0.07
Nkx2-2P42586 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-2P42586 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-2P42586 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.59□□□□□ -0.07
Nkx2-2P42586 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Nkx2-2P42586 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-2P42586 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-2P42586 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-2P42586 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-2P42586 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-2P42586 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.59□□□□□ -0.07
Nkx2-2P42586 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nkx2-2P42586 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.58□□□□□ -0.07
Nkx2-2P42586 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Nkx2-2P42586 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nkx2-2P42586 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nkx2-2P42586 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nkx2-2P42586 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nkx2-2P42586 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nkx2-2P42586 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Nkx2-2P42586 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-2P42586 Gm12895-201ENSMUST00000122214 226 ntBASIC14.58□□□□□ -0.08
Nkx2-2P42586 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.58□□□□□ -0.08
Nkx2-2P42586 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Nkx2-2P42586 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Nkx2-2P42586 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Nkx2-2P42586 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.58□□□□□ -0.08
Nkx2-2P42586 Gm18669-201ENSMUST00000216049 778 ntBASIC14.58□□□□□ -0.08
Nkx2-2P42586 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.58□□□□□ -0.08
Nkx2-2P42586 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.58□□□□□ -0.08
Nkx2-2P42586 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-2P42586 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-2P42586 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-2P42586 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-2P42586 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.58□□□□□ -0.08
Nkx2-2P42586 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-2P42586 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-2P42586 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-2P42586 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-2P42586 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-2P42586 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Nkx2-2P42586 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.57□□□□□ -0.08
Nkx2-2P42586 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-2P42586 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-2P42586 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-2P42586 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-2P42586 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-2P42586 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-2P42586 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-2P42586 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.57□□□□□ -0.08
Nkx2-2P42586 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-2P42586 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms