Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Abca1P41233 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Abca1P41233 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Abca1P41233 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Abca1P41233 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.24□□□□□ -0.29
Abca1P41233 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Abca1P41233 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Abca1P41233 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Abca1P41233 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Abca1P41233 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Abca1P41233 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Abca1P41233 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Abca1P41233 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Abca1P41233 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.23□□□□□ -0.29
Abca1P41233 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Abca1P41233 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Abca1P41233 Gm12497-201ENSMUST00000138778 237 ntBASIC13.23□□□□□ -0.29
Abca1P41233 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Abca1P41233 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.23□□□□□ -0.29
Abca1P41233 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Abca1P41233 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Abca1P41233 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Abca1P41233 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Abca1P41233 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.23□□□□□ -0.29
Abca1P41233 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Abca1P41233 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Abca1P41233 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Abca1P41233 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Abca1P41233 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Abca1P41233 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Abca1P41233 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Abca1P41233 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Abca1P41233 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.23□□□□□ -0.29
Abca1P41233 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Abca1P41233 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.23□□□□□ -0.29
Abca1P41233 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Abca1P41233 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Abca1P41233 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Abca1P41233 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Abca1P41233 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Abca1P41233 Gm4535-201ENSMUST00000182274 558 ntBASIC13.23□□□□□ -0.29
Abca1P41233 Gm27628-201ENSMUST00000184911 107 ntBASIC13.23□□□□□ -0.29
Abca1P41233 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Abca1P41233 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Abca1P41233 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Abca1P41233 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.23□□□□□ -0.29
Abca1P41233 Gm10355-201ENSMUST00000097146 517 ntBASIC13.23□□□□□ -0.29
Abca1P41233 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Abca1P41233 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Abca1P41233 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.23□□□□□ -0.29
Abca1P41233 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Abca1P41233 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Abca1P41233 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Abca1P41233 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.22□□□□□ -0.29
Abca1P41233 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Abca1P41233 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Abca1P41233 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Abca1P41233 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Abca1P41233 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Abca1P41233 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Abca1P41233 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Abca1P41233 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Abca1P41233 Gm24513-201ENSMUST00000174964 138 ntBASIC13.22□□□□□ -0.29
Abca1P41233 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.22□□□□□ -0.29
Abca1P41233 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Abca1P41233 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Abca1P41233 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.22□□□□□ -0.29
Abca1P41233 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Abca1P41233 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Abca1P41233 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Abca1P41233 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Abca1P41233 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Abca1P41233 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Abca1P41233 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Abca1P41233 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Abca1P41233 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Abca1P41233 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Abca1P41233 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Abca1P41233 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Abca1P41233 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.22□□□□□ -0.29
Abca1P41233 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Abca1P41233 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.22□□□□□ -0.29
Abca1P41233 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Abca1P41233 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Abca1P41233 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Abca1P41233 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Abca1P41233 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Abca1P41233 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Abca1P41233 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Abca1P41233 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Abca1P41233 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Abca1P41233 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Abca1P41233 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Abca1P41233 Gm25990-201ENSMUST00000102440 86 ntBASIC13.21□□□□□ -0.29
Abca1P41233 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.21□□□□□ -0.29
Abca1P41233 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.21□□□□□ -0.29
Abca1P41233 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.21□□□□□ -0.29
Abca1P41233 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.21□□□□□ -0.29
Abca1P41233 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Abca1P41233 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms