Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox5P35710 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.43■□□□□ 0.38
Sox5P35710 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox5P35710 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.43■□□□□ 0.38
Sox5P35710 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Sox5P35710 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sox5P35710 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox5P35710 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox5P35710 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Sox5P35710 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox5P35710 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
Sox5P35710 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox5P35710 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox5P35710 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox5P35710 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox5P35710 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox5P35710 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox5P35710 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Sox5P35710 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sox5P35710 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox5P35710 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Sox5P35710 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox5P35710 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.42■□□□□ 0.38
Sox5P35710 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sox5P35710 Gm45058-201ENSMUST00000205810 766 ntBASIC17.42■□□□□ 0.38
Sox5P35710 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.42■□□□□ 0.38
Sox5P35710 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox5P35710 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox5P35710 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox5P35710 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sox5P35710 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox5P35710 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox5P35710 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox5P35710 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sox5P35710 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sox5P35710 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.41■□□□□ 0.38
Sox5P35710 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox5P35710 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sox5P35710 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox5P35710 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox5P35710 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Sox5P35710 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox5P35710 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.41■□□□□ 0.38
Sox5P35710 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.41■□□□□ 0.38
Sox5P35710 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.41■□□□□ 0.38
Sox5P35710 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox5P35710 Gm7889-201ENSMUST00000185591 958 ntBASIC17.41■□□□□ 0.38
Sox5P35710 Gm37722-201ENSMUST00000193757 208 ntBASIC17.41■□□□□ 0.38
Sox5P35710 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sox5P35710 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox5P35710 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox5P35710 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox5P35710 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox5P35710 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox5P35710 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox5P35710 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox5P35710 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.41■□□□□ 0.38
Sox5P35710 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sox5P35710 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Sox5P35710 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.4■□□□□ 0.38
Sox5P35710 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
Sox5P35710 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Sox5P35710 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Sox5P35710 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox5P35710 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox5P35710 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox5P35710 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox5P35710 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox5P35710 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox5P35710 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox5P35710 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox5P35710 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Sox5P35710 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox5P35710 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox5P35710 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Sox5P35710 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Sox5P35710 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Sox5P35710 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.39■□□□□ 0.37
Sox5P35710 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sox5P35710 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox5P35710 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.39■□□□□ 0.37
Sox5P35710 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sox5P35710 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox5P35710 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox5P35710 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox5P35710 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox5P35710 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.39■□□□□ 0.37
Sox5P35710 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox5P35710 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox5P35710 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox5P35710 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Sox5P35710 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox5P35710 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox5P35710 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox5P35710 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox5P35710 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.39■□□□□ 0.37
Sox5P35710 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox5P35710 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.39■□□□□ 0.37
Sox5P35710 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.39■□□□□ 0.37
Sox5P35710 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms