Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfc1P35601 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfc1P35601 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfc1P35601 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfc1P35601 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfc1P35601 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC16.84■□□□□ 0.29
Rfc1P35601 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.84■□□□□ 0.29
Rfc1P35601 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfc1P35601 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfc1P35601 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfc1P35601 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rfc1P35601 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfc1P35601 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfc1P35601 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Rfc1P35601 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfc1P35601 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfc1P35601 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rfc1P35601 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Rfc1P35601 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.84■□□□□ 0.29
Rfc1P35601 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfc1P35601 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Rfc1P35601 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
Rfc1P35601 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.83■□□□□ 0.28
Rfc1P35601 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.83■□□□□ 0.28
Rfc1P35601 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rfc1P35601 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfc1P35601 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rfc1P35601 Gm37025-201ENSMUST00000195159 829 ntBASIC16.83■□□□□ 0.28
Rfc1P35601 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Rfc1P35601 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rfc1P35601 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rfc1P35601 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.83■□□□□ 0.28
Rfc1P35601 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfc1P35601 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfc1P35601 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfc1P35601 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfc1P35601 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rfc1P35601 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.83■□□□□ 0.28
Rfc1P35601 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.82■□□□□ 0.28
Rfc1P35601 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfc1P35601 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfc1P35601 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfc1P35601 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rfc1P35601 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rfc1P35601 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfc1P35601 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC16.82■□□□□ 0.28
Rfc1P35601 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Rfc1P35601 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfc1P35601 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Rfc1P35601 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfc1P35601 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Rfc1P35601 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfc1P35601 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfc1P35601 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rfc1P35601 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfc1P35601 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfc1P35601 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfc1P35601 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfc1P35601 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfc1P35601 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfc1P35601 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfc1P35601 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfc1P35601 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rfc1P35601 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfc1P35601 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Rfc1P35601 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfc1P35601 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Rfc1P35601 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Rfc1P35601 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.81■□□□□ 0.28
Rfc1P35601 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rfc1P35601 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfc1P35601 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfc1P35601 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.81■□□□□ 0.28
Rfc1P35601 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfc1P35601 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfc1P35601 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.81■□□□□ 0.28
Rfc1P35601 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rfc1P35601 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfc1P35601 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfc1P35601 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfc1P35601 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.81■□□□□ 0.28
Rfc1P35601 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfc1P35601 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.8■□□□□ 0.28
Rfc1P35601 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rfc1P35601 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfc1P35601 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfc1P35601 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfc1P35601 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.8■□□□□ 0.28
Rfc1P35601 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rfc1P35601 Gm27000-201ENSMUST00000182943 842 ntBASIC16.8■□□□□ 0.28
Rfc1P35601 Gm8520-201ENSMUST00000186517 868 ntBASIC16.8■□□□□ 0.28
Rfc1P35601 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfc1P35601 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfc1P35601 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfc1P35601 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rfc1P35601 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfc1P35601 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Rfc1P35601 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfc1P35601 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfc1P35601 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms