Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Foxa1P35582 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.74□□□□□ -0.05
Foxa1P35582 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.74□□□□□ -0.05
Foxa1P35582 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Foxa1P35582 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Foxa1P35582 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Foxa1P35582 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Foxa1P35582 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Foxa1P35582 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Foxa1P35582 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.74□□□□□ -0.05
Foxa1P35582 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.74□□□□□ -0.05
Foxa1P35582 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Foxa1P35582 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Foxa1P35582 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Foxa1P35582 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Foxa1P35582 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Foxa1P35582 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Foxa1P35582 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Foxa1P35582 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Foxa1P35582 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Foxa1P35582 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Foxa1P35582 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Foxa1P35582 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Foxa1P35582 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Foxa1P35582 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Foxa1P35582 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Foxa1P35582 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Foxa1P35582 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Foxa1P35582 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.73□□□□□ -0.05
Foxa1P35582 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Foxa1P35582 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Foxa1P35582 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Foxa1P35582 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Foxa1P35582 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Foxa1P35582 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Foxa1P35582 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Foxa1P35582 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Foxa1P35582 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Foxa1P35582 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Foxa1P35582 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Foxa1P35582 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.73□□□□□ -0.05
Foxa1P35582 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Foxa1P35582 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Foxa1P35582 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Foxa1P35582 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Foxa1P35582 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Foxa1P35582 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Foxa1P35582 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Foxa1P35582 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Foxa1P35582 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Foxa1P35582 Gm15372-201ENSMUST00000120729 834 ntBASIC14.72□□□□□ -0.05
Foxa1P35582 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.72□□□□□ -0.05
Foxa1P35582 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Foxa1P35582 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.72□□□□□ -0.05
Foxa1P35582 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.72□□□□□ -0.05
Foxa1P35582 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.72□□□□□ -0.05
Foxa1P35582 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
Foxa1P35582 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Foxa1P35582 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Foxa1P35582 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Foxa1P35582 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Foxa1P35582 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Foxa1P35582 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Foxa1P35582 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.72□□□□□ -0.05
Foxa1P35582 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Foxa1P35582 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Foxa1P35582 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Foxa1P35582 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Foxa1P35582 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Foxa1P35582 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Foxa1P35582 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Foxa1P35582 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Foxa1P35582 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Foxa1P35582 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Foxa1P35582 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Foxa1P35582 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.71□□□□□ -0.05
Foxa1P35582 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.71□□□□□ -0.05
Foxa1P35582 Gm25406-201ENSMUST00000157599 105 ntBASIC14.71□□□□□ -0.05
Foxa1P35582 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.71□□□□□ -0.05
Foxa1P35582 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Foxa1P35582 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Foxa1P35582 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Foxa1P35582 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Foxa1P35582 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Foxa1P35582 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Foxa1P35582 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Foxa1P35582 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Foxa1P35582 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Foxa1P35582 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Foxa1P35582 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Foxa1P35582 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.71□□□□□ -0.06
Foxa1P35582 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Foxa1P35582 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.71□□□□□ -0.06
Foxa1P35582 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.71□□□□□ -0.06
Foxa1P35582 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Foxa1P35582 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Foxa1P35582 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Foxa1P35582 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Foxa1P35582 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.7□□□□□ -0.06
Foxa1P35582 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms