Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col8a2P25318 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col8a2P25318 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col8a2P25318 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col8a2P25318 Mir5131-201ENSMUST00000175426 93 ntBASIC13.29□□□□□ -0.28
Col8a2P25318 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Col8a2P25318 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.29□□□□□ -0.28
Col8a2P25318 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.29□□□□□ -0.28
Col8a2P25318 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col8a2P25318 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col8a2P25318 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.29□□□□□ -0.28
Col8a2P25318 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col8a2P25318 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col8a2P25318 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col8a2P25318 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Col8a2P25318 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col8a2P25318 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.29□□□□□ -0.28
Col8a2P25318 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col8a2P25318 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col8a2P25318 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col8a2P25318 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col8a2P25318 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Col8a2P25318 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Col8a2P25318 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col8a2P25318 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Col8a2P25318 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.29□□□□□ -0.28
Col8a2P25318 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col8a2P25318 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col8a2P25318 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col8a2P25318 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col8a2P25318 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col8a2P25318 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col8a2P25318 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.28□□□□□ -0.28
Col8a2P25318 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col8a2P25318 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col8a2P25318 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col8a2P25318 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col8a2P25318 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col8a2P25318 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col8a2P25318 Gm11780-201ENSMUST00000136880 516 ntBASIC13.28□□□□□ -0.28
Col8a2P25318 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.28□□□□□ -0.28
Col8a2P25318 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.28□□□□□ -0.28
Col8a2P25318 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.28□□□□□ -0.28
Col8a2P25318 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col8a2P25318 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col8a2P25318 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col8a2P25318 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col8a2P25318 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col8a2P25318 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.28□□□□□ -0.28
Col8a2P25318 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col8a2P25318 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col8a2P25318 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col8a2P25318 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.28□□□□□ -0.28
Col8a2P25318 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col8a2P25318 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Col8a2P25318 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col8a2P25318 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col8a2P25318 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col8a2P25318 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col8a2P25318 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col8a2P25318 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.28□□□□□ -0.28
Col8a2P25318 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col8a2P25318 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col8a2P25318 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col8a2P25318 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Col8a2P25318 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.27□□□□□ -0.28
Col8a2P25318 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col8a2P25318 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col8a2P25318 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col8a2P25318 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col8a2P25318 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Col8a2P25318 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col8a2P25318 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col8a2P25318 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col8a2P25318 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Col8a2P25318 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col8a2P25318 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col8a2P25318 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.27□□□□□ -0.29
Col8a2P25318 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.27□□□□□ -0.29
Col8a2P25318 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.27□□□□□ -0.29
Col8a2P25318 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col8a2P25318 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col8a2P25318 Rps4l-201ENSMUST00000071745 943 ntBASIC13.27□□□□□ -0.29
Col8a2P25318 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col8a2P25318 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col8a2P25318 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col8a2P25318 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col8a2P25318 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col8a2P25318 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col8a2P25318 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col8a2P25318 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col8a2P25318 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col8a2P25318 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col8a2P25318 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Col8a2P25318 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col8a2P25318 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col8a2P25318 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col8a2P25318 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col8a2P25318 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.27□□□□□ -0.29
Col8a2P25318 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms