Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pde6bP23440 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Pde6bP23440 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pde6bP23440 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pde6bP23440 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.37■□□□□ 0.37
Pde6bP23440 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pde6bP23440 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pde6bP23440 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pde6bP23440 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pde6bP23440 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Pde6bP23440 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.37■□□□□ 0.37
Pde6bP23440 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pde6bP23440 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pde6bP23440 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pde6bP23440 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pde6bP23440 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pde6bP23440 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pde6bP23440 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pde6bP23440 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Pde6bP23440 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pde6bP23440 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.36■□□□□ 0.37
Pde6bP23440 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pde6bP23440 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pde6bP23440 Gm8097-201ENSMUST00000117903 829 ntBASIC17.36■□□□□ 0.37
Pde6bP23440 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pde6bP23440 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.36■□□□□ 0.37
Pde6bP23440 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pde6bP23440 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pde6bP23440 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pde6bP23440 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pde6bP23440 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pde6bP23440 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pde6bP23440 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Pde6bP23440 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pde6bP23440 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pde6bP23440 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pde6bP23440 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Pde6bP23440 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6bP23440 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Pde6bP23440 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6bP23440 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6bP23440 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6bP23440 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6bP23440 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6bP23440 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6bP23440 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6bP23440 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.35■□□□□ 0.37
Pde6bP23440 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6bP23440 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.35■□□□□ 0.37
Pde6bP23440 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
Pde6bP23440 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6bP23440 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6bP23440 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6bP23440 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6bP23440 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6bP23440 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6bP23440 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6bP23440 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6bP23440 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6bP23440 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6bP23440 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6bP23440 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6bP23440 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Pde6bP23440 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pde6bP23440 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.35■□□□□ 0.37
Pde6bP23440 Dancr-204ENSMUST00000132389 2347 ntBASIC17.35■□□□□ 0.37
Pde6bP23440 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
Pde6bP23440 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.34■□□□□ 0.37
Pde6bP23440 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Pde6bP23440 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.34■□□□□ 0.37
Pde6bP23440 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.34■□□□□ 0.37
Pde6bP23440 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pde6bP23440 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.34■□□□□ 0.37
Pde6bP23440 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Pde6bP23440 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.34■□□□□ 0.37
Pde6bP23440 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pde6bP23440 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Pde6bP23440 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.34■□□□□ 0.37
Pde6bP23440 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pde6bP23440 Gm2213-201ENSMUST00000197485 688 ntBASIC17.34■□□□□ 0.37
Pde6bP23440 Gm6089-201ENSMUST00000197666 938 ntBASIC17.34■□□□□ 0.37
Pde6bP23440 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pde6bP23440 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.34■□□□□ 0.37
Pde6bP23440 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pde6bP23440 Psmb5-202ENSMUST00000227257 622 ntBASIC17.34■□□□□ 0.37
Pde6bP23440 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pde6bP23440 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Pde6bP23440 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pde6bP23440 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pde6bP23440 Gm15590-201ENSMUST00000078419 552 ntBASIC17.34■□□□□ 0.37
Pde6bP23440 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Pde6bP23440 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Pde6bP23440 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pde6bP23440 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pde6bP23440 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pde6bP23440 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pde6bP23440 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pde6bP23440 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pde6bP23440 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Pde6bP23440 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms