Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmga1P17095 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmga1P17095 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.23■□□□□ 0.19
Hmga1P17095 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmga1P17095 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmga1P17095 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hmga1P17095 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hmga1P17095 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Hmga1P17095 Gm37153-201ENSMUST00000193637 231 ntBASIC16.23■□□□□ 0.19
Hmga1P17095 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmga1P17095 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmga1P17095 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmga1P17095 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Hmga1P17095 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Hmga1P17095 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.23■□□□□ 0.19
Hmga1P17095 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Hmga1P17095 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmga1P17095 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hmga1P17095 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hmga1P17095 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.22■□□□□ 0.19
Hmga1P17095 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmga1P17095 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.22■□□□□ 0.19
Hmga1P17095 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Hmga1P17095 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmga1P17095 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmga1P17095 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmga1P17095 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmga1P17095 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmga1P17095 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Hmga1P17095 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.22■□□□□ 0.19
Hmga1P17095 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.22■□□□□ 0.19
Hmga1P17095 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmga1P17095 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.22■□□□□ 0.19
Hmga1P17095 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.22■□□□□ 0.19
Hmga1P17095 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.22■□□□□ 0.19
Hmga1P17095 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.22■□□□□ 0.19
Hmga1P17095 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmga1P17095 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Hmga1P17095 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.22■□□□□ 0.19
Hmga1P17095 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmga1P17095 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.22■□□□□ 0.19
Hmga1P17095 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Hmga1P17095 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.22■□□□□ 0.19
Hmga1P17095 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmga1P17095 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmga1P17095 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hmga1P17095 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmga1P17095 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmga1P17095 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hmga1P17095 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hmga1P17095 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hmga1P17095 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hmga1P17095 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hmga1P17095 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hmga1P17095 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hmga1P17095 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hmga1P17095 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.21■□□□□ 0.19
Hmga1P17095 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hmga1P17095 Gm11594-201ENSMUST00000122313 162 ntBASIC16.21■□□□□ 0.19
Hmga1P17095 Gm12260-201ENSMUST00000122447 411 ntBASIC16.21■□□□□ 0.19
Hmga1P17095 Gm37935-201ENSMUST00000192012 982 ntBASIC16.21■□□□□ 0.19
Hmga1P17095 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hmga1P17095 Gm45167-201ENSMUST00000208007 322 ntBASIC16.21■□□□□ 0.19
Hmga1P17095 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.21■□□□□ 0.19
Hmga1P17095 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hmga1P17095 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hmga1P17095 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hmga1P17095 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Hmga1P17095 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Hmga1P17095 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hmga1P17095 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hmga1P17095 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hmga1P17095 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Hmga1P17095 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hmga1P17095 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hmga1P17095 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hmga1P17095 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Hmga1P17095 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Hmga1P17095 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.21■□□□□ 0.18
Hmga1P17095 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Hmga1P17095 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Hmga1P17095 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Hmga1P17095 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.21■□□□□ 0.18
Hmga1P17095 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.2■□□□□ 0.18
Hmga1P17095 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hmga1P17095 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hmga1P17095 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hmga1P17095 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Hmga1P17095 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hmga1P17095 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.2■□□□□ 0.18
Hmga1P17095 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hmga1P17095 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.2■□□□□ 0.18
Hmga1P17095 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Hmga1P17095 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hmga1P17095 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hmga1P17095 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.2■□□□□ 0.18
Hmga1P17095 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hmga1P17095 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hmga1P17095 Gm4899-201ENSMUST00000178708 719 ntBASIC16.2■□□□□ 0.18
Hmga1P17095 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms