Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Smim1P0C8K7 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Smim1P0C8K7 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Smim1P0C8K7 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smim1P0C8K7 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Smim1P0C8K7 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smim1P0C8K7 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Smim1P0C8K7 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Smim1P0C8K7 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC11.02□□□□□ -0.65
Smim1P0C8K7 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Smim1P0C8K7 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC11.02□□□□□ -0.65
Smim1P0C8K7 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smim1P0C8K7 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC11.02□□□□□ -0.65
Smim1P0C8K7 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Smim1P0C8K7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Smim1P0C8K7 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smim1P0C8K7 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC11.02□□□□□ -0.65
Smim1P0C8K7 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC11.02□□□□□ -0.65
Smim1P0C8K7 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Smim1P0C8K7 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smim1P0C8K7 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smim1P0C8K7 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smim1P0C8K7 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smim1P0C8K7 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smim1P0C8K7 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smim1P0C8K7 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Smim1P0C8K7 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Smim1P0C8K7 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smim1P0C8K7 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smim1P0C8K7 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC11.01□□□□□ -0.65
Smim1P0C8K7 Gm11839-201ENSMUST00000120647 1953 ntBASIC11.01□□□□□ -0.65
Smim1P0C8K7 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smim1P0C8K7 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smim1P0C8K7 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smim1P0C8K7 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smim1P0C8K7 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smim1P0C8K7 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Smim1P0C8K7 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smim1P0C8K7 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smim1P0C8K7 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smim1P0C8K7 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Smim1P0C8K7 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smim1P0C8K7 Gm37297-201ENSMUST00000192974 2384 ntBASIC11.01□□□□□ -0.65
Smim1P0C8K7 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Smim1P0C8K7 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC11.01□□□□□ -0.65
Smim1P0C8K7 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smim1P0C8K7 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smim1P0C8K7 Gm14464-201ENSMUST00000119658 1254 ntBASIC11.01□□□□□ -0.65
Smim1P0C8K7 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smim1P0C8K7 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC11.01□□□□□ -0.65
Smim1P0C8K7 Gm27000-201ENSMUST00000182943 842 ntBASIC11.01□□□□□ -0.65
Smim1P0C8K7 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smim1P0C8K7 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Smim1P0C8K7 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Smim1P0C8K7 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smim1P0C8K7 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smim1P0C8K7 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Smim1P0C8K7 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Smim1P0C8K7 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smim1P0C8K7 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Smim1P0C8K7 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smim1P0C8K7 Efs-202ENSMUST00000227037 2540 ntBASIC11.01□□□□□ -0.65
Smim1P0C8K7 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smim1P0C8K7 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smim1P0C8K7 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Smim1P0C8K7 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smim1P0C8K7 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smim1P0C8K7 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smim1P0C8K7 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smim1P0C8K7 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smim1P0C8K7 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smim1P0C8K7 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smim1P0C8K7 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smim1P0C8K7 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11□□□□□ -0.65
Smim1P0C8K7 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Smim1P0C8K7 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smim1P0C8K7 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Smim1P0C8K7 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Smim1P0C8K7 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smim1P0C8K7 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Smim1P0C8K7 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smim1P0C8K7 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smim1P0C8K7 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Smim1P0C8K7 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Smim1P0C8K7 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Smim1P0C8K7 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC11□□□□□ -0.65
Smim1P0C8K7 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smim1P0C8K7 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smim1P0C8K7 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smim1P0C8K7 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smim1P0C8K7 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smim1P0C8K7 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smim1P0C8K7 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Smim1P0C8K7 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC11□□□□□ -0.65
Smim1P0C8K7 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Smim1P0C8K7 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC11□□□□□ -0.65
Smim1P0C8K7 Mir6349-201ENSMUST00000184059 97 ntBASIC11□□□□□ -0.65
Smim1P0C8K7 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC11□□□□□ -0.65
Smim1P0C8K7 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smim1P0C8K7 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms