Protein–RNA interactions for Protein: P08553

Nefm, Neurofilament medium polypeptide, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NefmP08553 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NefmP08553 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
NefmP08553 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC23.56■■□□□ 1.36
NefmP08553 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NefmP08553 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
NefmP08553 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC23.56■■□□□ 1.36
NefmP08553 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NefmP08553 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC23.56■■□□□ 1.36
NefmP08553 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC23.56■■□□□ 1.36
NefmP08553 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
NefmP08553 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC23.56■■□□□ 1.36
NefmP08553 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
NefmP08553 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NefmP08553 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NefmP08553 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NefmP08553 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NefmP08553 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
NefmP08553 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
NefmP08553 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NefmP08553 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC23.55■■□□□ 1.36
NefmP08553 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC23.55■■□□□ 1.36
NefmP08553 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
NefmP08553 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
NefmP08553 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
NefmP08553 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
NefmP08553 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NefmP08553 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NefmP08553 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NefmP08553 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
NefmP08553 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NefmP08553 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
NefmP08553 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
NefmP08553 Gm9889-202ENSMUST00000206983 1577 ntBASIC23.54■■□□□ 1.36
NefmP08553 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC23.54■■□□□ 1.36
NefmP08553 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
NefmP08553 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NefmP08553 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
NefmP08553 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC23.54■■□□□ 1.36
NefmP08553 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
NefmP08553 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC23.54■■□□□ 1.36
NefmP08553 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC23.54■■□□□ 1.36
NefmP08553 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC23.53■■□□□ 1.36
NefmP08553 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
NefmP08553 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NefmP08553 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NefmP08553 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
NefmP08553 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
NefmP08553 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
NefmP08553 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC23.53■■□□□ 1.36
NefmP08553 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC23.53■■□□□ 1.36
NefmP08553 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NefmP08553 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
NefmP08553 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
NefmP08553 Gm9484-201ENSMUST00000195892 1159 ntBASIC23.53■■□□□ 1.36
NefmP08553 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC23.53■■□□□ 1.36
NefmP08553 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
NefmP08553 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NefmP08553 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
NefmP08553 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NefmP08553 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC23.53■■□□□ 1.36
NefmP08553 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
NefmP08553 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
NefmP08553 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
NefmP08553 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC23.52■■□□□ 1.36
NefmP08553 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
NefmP08553 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
NefmP08553 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC23.52■■□□□ 1.36
NefmP08553 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC23.52■■□□□ 1.36
NefmP08553 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
NefmP08553 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
NefmP08553 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
NefmP08553 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC23.52■■□□□ 1.36
NefmP08553 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NefmP08553 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.35
NefmP08553 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NefmP08553 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
NefmP08553 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NefmP08553 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
NefmP08553 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
NefmP08553 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NefmP08553 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
NefmP08553 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC23.51■■□□□ 1.35
NefmP08553 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC23.51■■□□□ 1.35
NefmP08553 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NefmP08553 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
NefmP08553 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC23.51■■□□□ 1.35
NefmP08553 Gm13559-201ENSMUST00000120476 863 ntBASIC23.51■■□□□ 1.35
NefmP08553 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC23.51■■□□□ 1.35
NefmP08553 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC23.51■■□□□ 1.35
NefmP08553 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC23.51■■□□□ 1.35
NefmP08553 AC159205.6-201ENSMUST00000224935 887 ntBASIC23.51■■□□□ 1.35
NefmP08553 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
NefmP08553 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
NefmP08553 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC23.51■■□□□ 1.35
NefmP08553 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
NefmP08553 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NefmP08553 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NefmP08553 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NefmP08553 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NefmP08553 BC037039-201ENSMUST00000192003 2205 ntBASIC23.51■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms