Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.18□□□□□ -0.14
P06344 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P06344 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
P06344 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
P06344 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.18□□□□□ -0.14
P06344 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.18□□□□□ -0.14
P06344 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.18□□□□□ -0.14
P06344 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
P06344 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
P06344 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
P06344 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P06344 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
P06344 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
P06344 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
P06344 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
P06344 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
P06344 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
P06344 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P06344 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
P06344 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
P06344 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P06344 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.17□□□□□ -0.14
P06344 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P06344 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P06344 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P06344 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
P06344 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P06344 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
P06344 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
P06344 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
P06344 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
P06344 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
P06344 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.17□□□□□ -0.14
P06344 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.17□□□□□ -0.14
P06344 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.17□□□□□ -0.14
P06344 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P06344 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P06344 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P06344 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
P06344 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
P06344 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P06344 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P06344 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
P06344 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P06344 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.17□□□□□ -0.14
P06344 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P06344 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
P06344 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
P06344 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P06344 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P06344 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
P06344 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P06344 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P06344 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P06344 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P06344 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P06344 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.16□□□□□ -0.14
P06344 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P06344 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P06344 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
P06344 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P06344 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.16□□□□□ -0.14
P06344 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.16□□□□□ -0.14
P06344 Gm25406-201ENSMUST00000157599 105 ntBASIC14.16□□□□□ -0.14
P06344 Mir6404-201ENSMUST00000183699 94 ntBASIC14.16□□□□□ -0.14
P06344 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P06344 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P06344 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P06344 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P06344 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.16□□□□□ -0.14
P06344 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P06344 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.16□□□□□ -0.14
P06344 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
P06344 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P06344 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P06344 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
P06344 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
P06344 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P06344 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
P06344 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.15□□□□□ -0.14
P06344 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
P06344 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
P06344 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
P06344 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
P06344 Gm7506-201ENSMUST00000207758 815 ntBASIC14.15□□□□□ -0.14
P06344 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.15□□□□□ -0.14
P06344 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.15□□□□□ -0.14
P06344 Rps4l-201ENSMUST00000071745 943 ntBASIC14.15□□□□□ -0.14
P06344 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
P06344 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P06344 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
P06344 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.15□□□□□ -0.14
P06344 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
P06344 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P06344 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P06344 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P06344 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
P06344 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
P06344 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
P06344 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms