Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
P06320 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC10.1□□□□□ -0.79
P06320 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
P06320 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
P06320 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC10.1□□□□□ -0.79
P06320 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC10.1□□□□□ -0.79
P06320 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P06320 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
P06320 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P06320 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P06320 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P06320 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
P06320 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
P06320 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC10.1□□□□□ -0.79
P06320 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
P06320 Gm24841-201ENSMUST00000158676 357 ntBASIC10.1□□□□□ -0.79
P06320 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC10.1□□□□□ -0.79
P06320 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P06320 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
P06320 Alkbh1-212ENSMUST00000185301 408 ntBASIC10.1□□□□□ -0.79
P06320 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC10.1□□□□□ -0.79
P06320 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P06320 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P06320 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P06320 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
P06320 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
P06320 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P06320 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
P06320 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P06320 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC10.1□□□□□ -0.79
P06320 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P06320 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P06320 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
P06320 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC10.09□□□□□ -0.79
P06320 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC10.09□□□□□ -0.79
P06320 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06320 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06320 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06320 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
P06320 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC10.09□□□□□ -0.79
P06320 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
P06320 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P06320 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06320 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06320 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06320 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06320 Gm17661-201ENSMUST00000170317 270 ntBASIC10.09□□□□□ -0.79
P06320 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC10.09□□□□□ -0.79
P06320 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC10.09□□□□□ -0.79
P06320 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P06320 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06320 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
P06320 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06320 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06320 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
P06320 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06320 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06320 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06320 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
P06320 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC10.09□□□□□ -0.79
P06320 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06320 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06320 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P06320 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
P06320 Ccdc166-201ENSMUST00000182172 2584 ntBASIC10.09□□□□□ -0.79
P06320 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC10.09□□□□□ -0.79
P06320 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06320 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06320 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
P06320 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
P06320 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06320 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
P06320 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06320 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06320 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06320 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
P06320 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06320 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
P06320 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06320 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
P06320 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06320 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
P06320 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06320 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC10.08□□□□□ -0.8
P06320 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06320 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06320 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06320 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06320 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06320 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06320 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
P06320 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC10.08□□□□□ -0.8
P06320 Gm37025-201ENSMUST00000195159 829 ntBASIC10.08□□□□□ -0.8
P06320 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06320 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06320 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
P06320 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06320 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
P06320 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P06320 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms