Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
P04214 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04214 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.61■□□□□ 0.25
P04214 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.61■□□□□ 0.25
P04214 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04214 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
P04214 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
P04214 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.61■□□□□ 0.25
P04214 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04214 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04214 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
P04214 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04214 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04214 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04214 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04214 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04214 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
P04214 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P04214 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
P04214 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P04214 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P04214 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.6■□□□□ 0.25
P04214 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.6■□□□□ 0.25
P04214 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P04214 Gm22175-201ENSMUST00000175007 78 ntBASIC16.6■□□□□ 0.25
P04214 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P04214 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
P04214 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
P04214 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P04214 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P04214 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
P04214 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P04214 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P04214 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P04214 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P04214 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P04214 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.59■□□□□ 0.25
P04214 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.59■□□□□ 0.25
P04214 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
P04214 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
P04214 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P04214 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
P04214 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.59■□□□□ 0.25
P04214 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.59■□□□□ 0.25
P04214 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
P04214 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P04214 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P04214 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
P04214 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P04214 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
P04214 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.58■□□□□ 0.25
P04214 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.58■□□□□ 0.25
P04214 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
P04214 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
P04214 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
P04214 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
P04214 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
P04214 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
P04214 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
P04214 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
P04214 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.58■□□□□ 0.24
P04214 Gm9385-201ENSMUST00000117563 472 ntBASIC16.58■□□□□ 0.24
P04214 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.58■□□□□ 0.24
P04214 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.58■□□□□ 0.24
P04214 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.58■□□□□ 0.24
P04214 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.58■□□□□ 0.24
P04214 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.58■□□□□ 0.24
P04214 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.58■□□□□ 0.24
P04214 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
P04214 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
P04214 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
P04214 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
P04214 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.58■□□□□ 0.24
P04214 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
P04214 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
P04214 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.58■□□□□ 0.24
P04214 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
P04214 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.58■□□□□ 0.24
P04214 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
P04214 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
P04214 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
P04214 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
P04214 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P04214 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
P04214 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.57■□□□□ 0.24
P04214 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
P04214 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P04214 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
P04214 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
P04214 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
P04214 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P04214 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
P04214 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.57■□□□□ 0.24
P04214 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.57■□□□□ 0.24
P04214 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
P04214 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.57■□□□□ 0.24
P04214 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P04214 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
P04214 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
P04214 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms