Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
H3f3cP02301 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H3f3cP02301 Gm27357-201ENSMUST00000183754 135 ntBASIC13.69□□□□□ -0.22
H3f3cP02301 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.69□□□□□ -0.22
H3f3cP02301 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H3f3cP02301 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
H3f3cP02301 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H3f3cP02301 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.69□□□□□ -0.22
H3f3cP02301 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H3f3cP02301 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
H3f3cP02301 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H3f3cP02301 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
H3f3cP02301 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H3f3cP02301 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H3f3cP02301 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H3f3cP02301 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
H3f3cP02301 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H3f3cP02301 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H3f3cP02301 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
H3f3cP02301 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H3f3cP02301 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H3f3cP02301 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.68□□□□□ -0.22
H3f3cP02301 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.68□□□□□ -0.22
H3f3cP02301 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
H3f3cP02301 Gm13312-201ENSMUST00000119631 718 ntBASIC13.68□□□□□ -0.22
H3f3cP02301 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H3f3cP02301 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
H3f3cP02301 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
H3f3cP02301 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
H3f3cP02301 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.68□□□□□ -0.22
H3f3cP02301 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.68□□□□□ -0.22
H3f3cP02301 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
H3f3cP02301 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
H3f3cP02301 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
H3f3cP02301 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H3f3cP02301 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H3f3cP02301 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H3f3cP02301 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H3f3cP02301 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H3f3cP02301 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
H3f3cP02301 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H3f3cP02301 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H3f3cP02301 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
H3f3cP02301 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
H3f3cP02301 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H3f3cP02301 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.67□□□□□ -0.22
H3f3cP02301 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H3f3cP02301 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
H3f3cP02301 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
H3f3cP02301 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H3f3cP02301 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
H3f3cP02301 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
H3f3cP02301 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H3f3cP02301 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
H3f3cP02301 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
H3f3cP02301 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
H3f3cP02301 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.67□□□□□ -0.22
H3f3cP02301 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H3f3cP02301 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
H3f3cP02301 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H3f3cP02301 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.67□□□□□ -0.22
H3f3cP02301 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
H3f3cP02301 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.67□□□□□ -0.22
H3f3cP02301 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.67□□□□□ -0.22
H3f3cP02301 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.67□□□□□ -0.22
H3f3cP02301 Gm21362-201ENSMUST00000194272 928 ntBASIC13.67□□□□□ -0.22
H3f3cP02301 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.67□□□□□ -0.22
H3f3cP02301 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H3f3cP02301 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
H3f3cP02301 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H3f3cP02301 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
H3f3cP02301 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H3f3cP02301 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H3f3cP02301 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
H3f3cP02301 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
H3f3cP02301 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
H3f3cP02301 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H3f3cP02301 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
H3f3cP02301 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3f3cP02301 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3f3cP02301 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3f3cP02301 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3f3cP02301 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
H3f3cP02301 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.66□□□□□ -0.22
H3f3cP02301 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
H3f3cP02301 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.66□□□□□ -0.22
H3f3cP02301 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
H3f3cP02301 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
H3f3cP02301 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.66□□□□□ -0.22
H3f3cP02301 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.66□□□□□ -0.22
H3f3cP02301 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3f3cP02301 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3f3cP02301 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
H3f3cP02301 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3f3cP02301 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3f3cP02301 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
H3f3cP02301 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3f3cP02301 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
H3f3cP02301 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3f3cP02301 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms