Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vti1aO89116 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vti1aO89116 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.16■□□□□ 0.34
Vti1aO89116 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vti1aO89116 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vti1aO89116 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Vti1aO89116 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vti1aO89116 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Vti1aO89116 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vti1aO89116 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vti1aO89116 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vti1aO89116 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.15■□□□□ 0.34
Vti1aO89116 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Vti1aO89116 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.15■□□□□ 0.34
Vti1aO89116 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Vti1aO89116 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.15■□□□□ 0.34
Vti1aO89116 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vti1aO89116 Gm8000-201ENSMUST00000188378 592 ntBASIC17.15■□□□□ 0.34
Vti1aO89116 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vti1aO89116 Gm5364-201ENSMUST00000216789 889 ntBASIC17.15■□□□□ 0.34
Vti1aO89116 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vti1aO89116 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.15■□□□□ 0.34
Vti1aO89116 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vti1aO89116 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.15■□□□□ 0.34
Vti1aO89116 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vti1aO89116 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Vti1aO89116 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vti1aO89116 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vti1aO89116 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Vti1aO89116 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Vti1aO89116 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vti1aO89116 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.15■□□□□ 0.34
Vti1aO89116 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Vti1aO89116 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.14■□□□□ 0.33
Vti1aO89116 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vti1aO89116 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vti1aO89116 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vti1aO89116 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vti1aO89116 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vti1aO89116 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vti1aO89116 Gm12350-201ENSMUST00000121208 462 ntBASIC17.14■□□□□ 0.33
Vti1aO89116 Gm11594-201ENSMUST00000122313 162 ntBASIC17.14■□□□□ 0.33
Vti1aO89116 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.14■□□□□ 0.33
Vti1aO89116 Gm2213-201ENSMUST00000197485 688 ntBASIC17.14■□□□□ 0.33
Vti1aO89116 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.14■□□□□ 0.33
Vti1aO89116 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.14■□□□□ 0.33
Vti1aO89116 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.14■□□□□ 0.33
Vti1aO89116 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.14■□□□□ 0.33
Vti1aO89116 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vti1aO89116 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vti1aO89116 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Vti1aO89116 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vti1aO89116 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vti1aO89116 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vti1aO89116 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Vti1aO89116 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vti1aO89116 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vti1aO89116 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vti1aO89116 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Vti1aO89116 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
Vti1aO89116 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vti1aO89116 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Vti1aO89116 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vti1aO89116 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Vti1aO89116 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Vti1aO89116 Gm15173-201ENSMUST00000122049 433 ntBASIC17.13■□□□□ 0.33
Vti1aO89116 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.13■□□□□ 0.33
Vti1aO89116 Gm25925-201ENSMUST00000158314 306 ntBASIC17.13■□□□□ 0.33
Vti1aO89116 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Vti1aO89116 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.13■□□□□ 0.33
Vti1aO89116 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vti1aO89116 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vti1aO89116 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vti1aO89116 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vti1aO89116 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vti1aO89116 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vti1aO89116 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vti1aO89116 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vti1aO89116 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vti1aO89116 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vti1aO89116 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.12■□□□□ 0.33
Vti1aO89116 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Vti1aO89116 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vti1aO89116 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vti1aO89116 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vti1aO89116 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.12■□□□□ 0.33
Vti1aO89116 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vti1aO89116 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vti1aO89116 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vti1aO89116 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vti1aO89116 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.12■□□□□ 0.33
Vti1aO89116 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vti1aO89116 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vti1aO89116 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vti1aO89116 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Vti1aO89116 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vti1aO89116 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vti1aO89116 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vti1aO89116 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.11■□□□□ 0.33
Vti1aO89116 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms