Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CopeO89079 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.48■□□□□ 0.23
CopeO89079 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CopeO89079 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CopeO89079 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CopeO89079 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CopeO89079 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CopeO89079 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CopeO89079 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CopeO89079 Gm2274-201ENSMUST00000184539 609 ntBASIC16.48■□□□□ 0.23
CopeO89079 Gm7213-201ENSMUST00000215977 950 ntBASIC16.48■□□□□ 0.23
CopeO89079 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.48■□□□□ 0.23
CopeO89079 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CopeO89079 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CopeO89079 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.48■□□□□ 0.23
CopeO89079 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CopeO89079 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CopeO89079 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CopeO89079 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CopeO89079 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CopeO89079 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CopeO89079 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.48■□□□□ 0.23
CopeO89079 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CopeO89079 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CopeO89079 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CopeO89079 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CopeO89079 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CopeO89079 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CopeO89079 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CopeO89079 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CopeO89079 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CopeO89079 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CopeO89079 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CopeO89079 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
CopeO89079 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CopeO89079 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.47■□□□□ 0.23
CopeO89079 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CopeO89079 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CopeO89079 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.47■□□□□ 0.23
CopeO89079 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CopeO89079 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CopeO89079 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CopeO89079 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CopeO89079 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CopeO89079 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CopeO89079 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CopeO89079 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CopeO89079 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CopeO89079 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CopeO89079 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CopeO89079 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
CopeO89079 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CopeO89079 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CopeO89079 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CopeO89079 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CopeO89079 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
CopeO89079 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.46■□□□□ 0.23
CopeO89079 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CopeO89079 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.46■□□□□ 0.23
CopeO89079 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.46■□□□□ 0.23
CopeO89079 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
CopeO89079 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CopeO89079 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CopeO89079 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CopeO89079 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CopeO89079 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CopeO89079 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CopeO89079 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CopeO89079 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.46■□□□□ 0.23
CopeO89079 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CopeO89079 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CopeO89079 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CopeO89079 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CopeO89079 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CopeO89079 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CopeO89079 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CopeO89079 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
CopeO89079 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CopeO89079 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CopeO89079 Gm15039-201ENSMUST00000118914 875 ntBASIC16.45■□□□□ 0.22
CopeO89079 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.45■□□□□ 0.22
CopeO89079 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CopeO89079 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.45■□□□□ 0.22
CopeO89079 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.45■□□□□ 0.22
CopeO89079 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.45■□□□□ 0.22
CopeO89079 Gm10566-201ENSMUST00000086739 996 ntBASIC16.45■□□□□ 0.22
CopeO89079 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CopeO89079 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CopeO89079 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CopeO89079 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CopeO89079 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
CopeO89079 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CopeO89079 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CopeO89079 Sybu-209ENSMUST00000228639 4113 ntBASIC16.45■□□□□ 0.22
CopeO89079 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CopeO89079 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CopeO89079 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CopeO89079 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CopeO89079 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CopeO89079 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms