Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdac3O88895 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdac3O88895 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdac3O88895 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdac3O88895 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Hdac3O88895 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdac3O88895 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdac3O88895 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Hdac3O88895 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdac3O88895 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hdac3O88895 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdac3O88895 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.28□□□□□ -0.12
Hdac3O88895 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.28□□□□□ -0.12
Hdac3O88895 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.28□□□□□ -0.12
Hdac3O88895 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdac3O88895 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Hdac3O88895 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdac3O88895 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdac3O88895 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.28□□□□□ -0.12
Hdac3O88895 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.28□□□□□ -0.12
Hdac3O88895 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.28□□□□□ -0.12
Hdac3O88895 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdac3O88895 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdac3O88895 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hdac3O88895 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdac3O88895 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hdac3O88895 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdac3O88895 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdac3O88895 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdac3O88895 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdac3O88895 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdac3O88895 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Hdac3O88895 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Hdac3O88895 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hdac3O88895 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Hdac3O88895 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hdac3O88895 Asic1-205ENSMUST00000228185 1818 ntBASIC14.27□□□□□ -0.12
Hdac3O88895 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hdac3O88895 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Hdac3O88895 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Hdac3O88895 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Hdac3O88895 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hdac3O88895 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Hdac3O88895 Gm9013-201ENSMUST00000132939 882 ntBASIC14.27□□□□□ -0.13
Hdac3O88895 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Hdac3O88895 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.27□□□□□ -0.13
Hdac3O88895 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.27□□□□□ -0.13
Hdac3O88895 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hdac3O88895 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Hdac3O88895 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hdac3O88895 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hdac3O88895 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hdac3O88895 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hdac3O88895 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hdac3O88895 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Hdac3O88895 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hdac3O88895 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Hdac3O88895 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hdac3O88895 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hdac3O88895 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hdac3O88895 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac3O88895 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac3O88895 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
Hdac3O88895 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac3O88895 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac3O88895 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac3O88895 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac3O88895 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac3O88895 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac3O88895 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Hdac3O88895 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac3O88895 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Hdac3O88895 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac3O88895 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Hdac3O88895 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac3O88895 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac3O88895 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.26□□□□□ -0.13
Hdac3O88895 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac3O88895 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac3O88895 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Hdac3O88895 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Hdac3O88895 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac3O88895 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac3O88895 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac3O88895 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac3O88895 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.26□□□□□ -0.13
Hdac3O88895 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac3O88895 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Hdac3O88895 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac3O88895 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac3O88895 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac3O88895 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac3O88895 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Hdac3O88895 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdac3O88895 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdac3O88895 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Hdac3O88895 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Hdac3O88895 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Hdac3O88895 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Hdac3O88895 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms