Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Slc6a20bO88575 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc6a20bO88575 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.32■□□□□ 0.36
Slc6a20bO88575 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc6a20bO88575 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.32■□□□□ 0.36
Slc6a20bO88575 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.32■□□□□ 0.36
Slc6a20bO88575 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.32■□□□□ 0.36
Slc6a20bO88575 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17.32■□□□□ 0.36
Slc6a20bO88575 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC17.32■□□□□ 0.36
Slc6a20bO88575 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.32■□□□□ 0.36
Slc6a20bO88575 Arhgef33-209ENSMUST00000225223 714 ntBASIC17.32■□□□□ 0.36
Slc6a20bO88575 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc6a20bO88575 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc6a20bO88575 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Slc6a20bO88575 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Slc6a20bO88575 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.32■□□□□ 0.36
Slc6a20bO88575 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc6a20bO88575 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc6a20bO88575 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc6a20bO88575 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc6a20bO88575 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Slc6a20bO88575 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc6a20bO88575 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc6a20bO88575 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc6a20bO88575 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a20bO88575 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a20bO88575 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a20bO88575 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a20bO88575 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a20bO88575 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a20bO88575 Gm22175-201ENSMUST00000175007 78 ntBASIC17.31■□□□□ 0.36
Slc6a20bO88575 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.31■□□□□ 0.36
Slc6a20bO88575 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
Slc6a20bO88575 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a20bO88575 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a20bO88575 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Slc6a20bO88575 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC17.31■□□□□ 0.36
Slc6a20bO88575 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a20bO88575 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a20bO88575 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a20bO88575 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Slc6a20bO88575 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a20bO88575 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a20bO88575 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a20bO88575 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Slc6a20bO88575 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a20bO88575 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a20bO88575 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a20bO88575 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a20bO88575 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a20bO88575 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a20bO88575 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a20bO88575 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a20bO88575 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a20bO88575 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a20bO88575 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a20bO88575 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a20bO88575 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Slc6a20bO88575 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Slc6a20bO88575 Gm43125-201ENSMUST00000201724 730 ntBASIC17.3■□□□□ 0.36
Slc6a20bO88575 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a20bO88575 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.3■□□□□ 0.36
Slc6a20bO88575 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a20bO88575 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Slc6a20bO88575 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Slc6a20bO88575 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a20bO88575 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a20bO88575 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a20bO88575 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a20bO88575 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.29■□□□□ 0.36
Slc6a20bO88575 Mir449b-201ENSMUST00000104833 80 ntBASIC17.29■□□□□ 0.36
Slc6a20bO88575 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC17.29■□□□□ 0.36
Slc6a20bO88575 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC17.29■□□□□ 0.36
Slc6a20bO88575 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a20bO88575 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC17.29■□□□□ 0.36
Slc6a20bO88575 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.29■□□□□ 0.36
Slc6a20bO88575 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.29■□□□□ 0.36
Slc6a20bO88575 Rprl2-201ENSMUST00000157150 290 ntBASIC17.29■□□□□ 0.36
Slc6a20bO88575 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.29■□□□□ 0.36
Slc6a20bO88575 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC17.29■□□□□ 0.36
Slc6a20bO88575 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a20bO88575 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a20bO88575 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a20bO88575 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a20bO88575 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a20bO88575 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a20bO88575 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a20bO88575 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a20bO88575 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a20bO88575 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.28■□□□□ 0.36
Slc6a20bO88575 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a20bO88575 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a20bO88575 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a20bO88575 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a20bO88575 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.28■□□□□ 0.36
Slc6a20bO88575 AC122024.2-201ENSMUST00000220086 871 ntBASIC17.28■□□□□ 0.36
Slc6a20bO88575 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a20bO88575 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Slc6a20bO88575 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Slc6a20bO88575 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms