Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cldn1O88551 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.66□□□□□ -0.22
Cldn1O88551 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldn1O88551 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldn1O88551 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cldn1O88551 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.66□□□□□ -0.22
Cldn1O88551 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.66□□□□□ -0.22
Cldn1O88551 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cldn1O88551 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldn1O88551 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cldn1O88551 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldn1O88551 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cldn1O88551 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cldn1O88551 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cldn1O88551 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cldn1O88551 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cldn1O88551 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cldn1O88551 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cldn1O88551 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cldn1O88551 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cldn1O88551 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cldn1O88551 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cldn1O88551 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cldn1O88551 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cldn1O88551 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cldn1O88551 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.65□□□□□ -0.22
Cldn1O88551 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cldn1O88551 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Cldn1O88551 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.65□□□□□ -0.22
Cldn1O88551 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.65□□□□□ -0.22
Cldn1O88551 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.65□□□□□ -0.22
Cldn1O88551 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cldn1O88551 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Cldn1O88551 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cldn1O88551 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.65□□□□□ -0.22
Cldn1O88551 Gm43338-201ENSMUST00000198617 2223 ntBASIC13.65□□□□□ -0.22
Cldn1O88551 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cldn1O88551 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cldn1O88551 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cldn1O88551 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cldn1O88551 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cldn1O88551 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Cldn1O88551 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cldn1O88551 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.64□□□□□ -0.23
Cldn1O88551 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.64□□□□□ -0.23
Cldn1O88551 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Cldn1O88551 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cldn1O88551 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cldn1O88551 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cldn1O88551 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.64□□□□□ -0.23
Cldn1O88551 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cldn1O88551 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cldn1O88551 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cldn1O88551 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cldn1O88551 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Cldn1O88551 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cldn1O88551 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Cldn1O88551 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cldn1O88551 Gm14057-201ENSMUST00000120631 482 ntBASIC13.64□□□□□ -0.23
Cldn1O88551 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cldn1O88551 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cldn1O88551 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.64□□□□□ -0.23
Cldn1O88551 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.64□□□□□ -0.23
Cldn1O88551 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cldn1O88551 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Cldn1O88551 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cldn1O88551 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cldn1O88551 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.64□□□□□ -0.23
Cldn1O88551 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cldn1O88551 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cldn1O88551 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.63□□□□□ -0.23
Cldn1O88551 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cldn1O88551 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Cldn1O88551 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cldn1O88551 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cldn1O88551 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cldn1O88551 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Cldn1O88551 Gm8097-201ENSMUST00000117903 829 ntBASIC13.63□□□□□ -0.23
Cldn1O88551 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.63□□□□□ -0.23
Cldn1O88551 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Cldn1O88551 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.63□□□□□ -0.23
Cldn1O88551 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cldn1O88551 Gm11780-201ENSMUST00000136880 516 ntBASIC13.63□□□□□ -0.23
Cldn1O88551 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.63□□□□□ -0.23
Cldn1O88551 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.63□□□□□ -0.23
Cldn1O88551 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.63□□□□□ -0.23
Cldn1O88551 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cldn1O88551 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cldn1O88551 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cldn1O88551 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cldn1O88551 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cldn1O88551 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.63□□□□□ -0.23
Cldn1O88551 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cldn1O88551 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cldn1O88551 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cldn1O88551 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Cldn1O88551 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.63□□□□□ -0.23
Cldn1O88551 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cldn1O88551 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cldn1O88551 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms