Protein–RNA interactions for Protein: O88346

Tnnt1, Troponin T, slow skeletal muscle, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnnt1O88346 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnnt1O88346 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
Tnnt1O88346 AC154527.4-201ENSMUST00000224364 1667 ntBASIC20.31■□□□□ 0.84
Tnnt1O88346 Grk6-207ENSMUST00000225925 2769 ntBASIC20.31■□□□□ 0.84
Tnnt1O88346 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC20.31■□□□□ 0.84
Tnnt1O88346 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnnt1O88346 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnnt1O88346 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnnt1O88346 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tnnt1O88346 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnnt1O88346 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnnt1O88346 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnnt1O88346 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnnt1O88346 Gm4609-201ENSMUST00000106443 1002 ntBASIC20.3■□□□□ 0.84
Tnnt1O88346 Gm5138-201ENSMUST00000113842 1002 ntBASIC20.3■□□□□ 0.84
Tnnt1O88346 Gm15191-201ENSMUST00000117933 1000 ntBASIC20.3■□□□□ 0.84
Tnnt1O88346 Gm12182-201ENSMUST00000118655 1008 ntBASIC20.3■□□□□ 0.84
Tnnt1O88346 Gm13882-201ENSMUST00000120886 1002 ntBASIC20.3■□□□□ 0.84
Tnnt1O88346 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC20.3■□□□□ 0.84
Tnnt1O88346 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tnnt1O88346 Gm10284-201ENSMUST00000145057 1005 ntBASIC20.3■□□□□ 0.84
Tnnt1O88346 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC20.3■□□□□ 0.84
Tnnt1O88346 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC20.3■□□□□ 0.84
Tnnt1O88346 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC20.3■□□□□ 0.84
Tnnt1O88346 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnnt1O88346 Gm10481-201ENSMUST00000179228 1002 ntBASIC20.3■□□□□ 0.84
Tnnt1O88346 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC20.3■□□□□ 0.84
Tnnt1O88346 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC20.3■□□□□ 0.84
Tnnt1O88346 Gm2574-201ENSMUST00000181051 1002 ntBASIC20.3■□□□□ 0.84
Tnnt1O88346 Gm3200-201ENSMUST00000181493 1002 ntBASIC20.3■□□□□ 0.84
Tnnt1O88346 Gm8825-201ENSMUST00000182565 998 ntBASIC20.3■□□□□ 0.84
Tnnt1O88346 Gm4518-201ENSMUST00000182638 718 ntBASIC20.3■□□□□ 0.84
Tnnt1O88346 Gm8330-201ENSMUST00000182754 1008 ntBASIC20.3■□□□□ 0.84
Tnnt1O88346 Gm4575-201ENSMUST00000182991 1002 ntBASIC20.3■□□□□ 0.84
Tnnt1O88346 Gm8709-201ENSMUST00000183230 1012 ntBASIC20.3■□□□□ 0.84
Tnnt1O88346 Gm18622-201ENSMUST00000219361 595 ntBASIC20.3■□□□□ 0.84
Tnnt1O88346 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC20.3■□□□□ 0.84
Tnnt1O88346 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC20.3■□□□□ 0.84
Tnnt1O88346 Gm10293-201ENSMUST00000076317 1002 ntBASIC20.3■□□□□ 0.84
Tnnt1O88346 Gm6316-201ENSMUST00000082064 1020 ntBASIC20.3■□□□□ 0.84
Tnnt1O88346 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnnt1O88346 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnnt1O88346 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC20.3■□□□□ 0.84
Tnnt1O88346 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnnt1O88346 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tnnt1O88346 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnnt1O88346 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnnt1O88346 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnnt1O88346 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnnt1O88346 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnnt1O88346 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Tnnt1O88346 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tnnt1O88346 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tnnt1O88346 Gm6550-201ENSMUST00000187574 993 ntBASIC20.29■□□□□ 0.84
Tnnt1O88346 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC20.29■□□□□ 0.84
Tnnt1O88346 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC20.29■□□□□ 0.84
Tnnt1O88346 AC154757.1-201ENSMUST00000228289 336 ntBASIC20.29■□□□□ 0.84
Tnnt1O88346 AC117588.1-201ENSMUST00000228510 999 ntBASIC20.29■□□□□ 0.84
Tnnt1O88346 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnnt1O88346 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnnt1O88346 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnnt1O88346 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC20.29■□□□□ 0.84
Tnnt1O88346 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tnnt1O88346 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnnt1O88346 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Tnnt1O88346 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnnt1O88346 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Tnnt1O88346 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnnt1O88346 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnnt1O88346 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Tnnt1O88346 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnnt1O88346 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnnt1O88346 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Tnnt1O88346 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnnt1O88346 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tnnt1O88346 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tnnt1O88346 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC20.28■□□□□ 0.84
Tnnt1O88346 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC20.28■□□□□ 0.84
Tnnt1O88346 Gm5837-201ENSMUST00000191844 1369 ntBASIC20.28■□□□□ 0.84
Tnnt1O88346 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC20.28■□□□□ 0.84
Tnnt1O88346 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnnt1O88346 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnnt1O88346 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnnt1O88346 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tnnt1O88346 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC20.27■□□□□ 0.84
Tnnt1O88346 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tnnt1O88346 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Tnnt1O88346 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Tnnt1O88346 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC20.27■□□□□ 0.84
Tnnt1O88346 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Tnnt1O88346 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tnnt1O88346 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tnnt1O88346 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tnnt1O88346 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tnnt1O88346 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC20.27■□□□□ 0.84
Tnnt1O88346 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC20.27■□□□□ 0.83
Tnnt1O88346 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Tnnt1O88346 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Tnnt1O88346 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Tnnt1O88346 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms