Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nid2O88322 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nid2O88322 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nid2O88322 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nid2O88322 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC20.61■□□□□ 0.89
Nid2O88322 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nid2O88322 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nid2O88322 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC20.61■□□□□ 0.89
Nid2O88322 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC20.61■□□□□ 0.89
Nid2O88322 Gm5626-201ENSMUST00000222151 1058 ntBASIC20.61■□□□□ 0.89
Nid2O88322 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nid2O88322 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC20.61■□□□□ 0.89
Nid2O88322 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Nid2O88322 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nid2O88322 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nid2O88322 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nid2O88322 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nid2O88322 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nid2O88322 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Nid2O88322 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nid2O88322 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nid2O88322 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nid2O88322 Wnt10b-206ENSMUST00000228546 2709 ntBASIC20.6■□□□□ 0.89
Nid2O88322 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Nid2O88322 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC20.6■□□□□ 0.89
Nid2O88322 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC20.6■□□□□ 0.89
Nid2O88322 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC20.6■□□□□ 0.89
Nid2O88322 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nid2O88322 Gm23547-201ENSMUST00000158210 271 ntBASIC20.6■□□□□ 0.89
Nid2O88322 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC20.6■□□□□ 0.89
Nid2O88322 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC20.6■□□□□ 0.89
Nid2O88322 AC124732.2-201ENSMUST00000221977 316 ntBASIC20.6■□□□□ 0.89
Nid2O88322 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nid2O88322 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nid2O88322 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nid2O88322 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nid2O88322 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nid2O88322 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nid2O88322 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nid2O88322 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nid2O88322 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nid2O88322 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC20.59■□□□□ 0.89
Nid2O88322 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC20.59■□□□□ 0.89
Nid2O88322 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nid2O88322 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nid2O88322 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC20.59■□□□□ 0.89
Nid2O88322 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nid2O88322 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nid2O88322 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nid2O88322 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Nid2O88322 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Nid2O88322 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nid2O88322 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC20.58■□□□□ 0.88
Nid2O88322 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Nid2O88322 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Nid2O88322 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC20.58■□□□□ 0.88
Nid2O88322 CT025535.1-201ENSMUST00000227172 491 ntBASIC20.58■□□□□ 0.88
Nid2O88322 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Nid2O88322 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nid2O88322 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nid2O88322 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.58■□□□□ 0.88
Nid2O88322 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nid2O88322 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nid2O88322 Gm13410-201ENSMUST00000117058 1415 ntBASIC20.57■□□□□ 0.88
Nid2O88322 Gm5184-201ENSMUST00000220417 1702 ntBASIC20.57■□□□□ 0.88
Nid2O88322 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Nid2O88322 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Nid2O88322 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nid2O88322 Gm25287-201ENSMUST00000103846 110 ntBASIC20.57■□□□□ 0.88
Nid2O88322 Gm22918-201ENSMUST00000103855 110 ntBASIC20.57■□□□□ 0.88
Nid2O88322 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nid2O88322 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Nid2O88322 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Nid2O88322 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nid2O88322 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nid2O88322 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC20.57■□□□□ 0.88
Nid2O88322 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nid2O88322 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nid2O88322 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Nid2O88322 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC20.57■□□□□ 0.88
Nid2O88322 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nid2O88322 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC20.57■□□□□ 0.88
Nid2O88322 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Nid2O88322 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nid2O88322 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nid2O88322 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nid2O88322 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nid2O88322 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nid2O88322 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nid2O88322 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nid2O88322 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nid2O88322 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nid2O88322 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Nid2O88322 Gm7336-201ENSMUST00000107041 1232 ntBASIC20.56■□□□□ 0.88
Nid2O88322 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC20.56■□□□□ 0.88
Nid2O88322 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nid2O88322 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nid2O88322 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC20.56■□□□□ 0.88
Nid2O88322 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nid2O88322 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms