Protein–RNA interactions for Protein: O70491

Stra6, Receptor for retinol uptake STRA6, mousemouse

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra6O70491 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Stra6O70491 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Stra6O70491 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Stra6O70491 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.56■□□□□ 0.4
Stra6O70491 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stra6O70491 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stra6O70491 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stra6O70491 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Stra6O70491 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stra6O70491 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Stra6O70491 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Stra6O70491 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Stra6O70491 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stra6O70491 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.56■□□□□ 0.4
Stra6O70491 Gm25911-201ENSMUST00000157621 56 ntBASIC17.56■□□□□ 0.4
Stra6O70491 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stra6O70491 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stra6O70491 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stra6O70491 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stra6O70491 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Stra6O70491 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stra6O70491 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stra6O70491 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Stra6O70491 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Stra6O70491 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Stra6O70491 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Stra6O70491 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Stra6O70491 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Stra6O70491 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stra6O70491 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
Stra6O70491 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Stra6O70491 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stra6O70491 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Stra6O70491 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stra6O70491 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stra6O70491 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stra6O70491 Gm8344-201ENSMUST00000119813 856 ntBASIC17.55■□□□□ 0.4
Stra6O70491 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.55■□□□□ 0.4
Stra6O70491 Gm10175-201ENSMUST00000086013 645 ntBASIC17.55■□□□□ 0.4
Stra6O70491 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stra6O70491 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.55■□□□□ 0.4
Stra6O70491 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stra6O70491 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stra6O70491 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Stra6O70491 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Stra6O70491 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Stra6O70491 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stra6O70491 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stra6O70491 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stra6O70491 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Stra6O70491 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stra6O70491 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stra6O70491 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stra6O70491 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Stra6O70491 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stra6O70491 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stra6O70491 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Stra6O70491 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stra6O70491 Gm23935-201ENSMUST00000102303 57 ntBASIC17.54■□□□□ 0.4
Stra6O70491 Gm24270-201ENSMUST00000102326 57 ntBASIC17.54■□□□□ 0.4
Stra6O70491 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.54■□□□□ 0.4
Stra6O70491 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.54■□□□□ 0.4
Stra6O70491 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Stra6O70491 Gm24245-201ENSMUST00000157318 57 ntBASIC17.54■□□□□ 0.4
Stra6O70491 Gm6736-201ENSMUST00000166583 948 ntBASIC17.54■□□□□ 0.4
Stra6O70491 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Stra6O70491 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Stra6O70491 Gm27300-201ENSMUST00000184085 97 ntBASIC17.54■□□□□ 0.4
Stra6O70491 Gm27335-201ENSMUST00000184758 97 ntBASIC17.54■□□□□ 0.4
Stra6O70491 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Stra6O70491 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stra6O70491 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.54■□□□□ 0.4
Stra6O70491 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Stra6O70491 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stra6O70491 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.54■□□□□ 0.4
Stra6O70491 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stra6O70491 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stra6O70491 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Stra6O70491 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Stra6O70491 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stra6O70491 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Stra6O70491 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stra6O70491 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stra6O70491 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.53■□□□□ 0.4
Stra6O70491 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Stra6O70491 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Stra6O70491 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.53■□□□□ 0.4
Stra6O70491 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stra6O70491 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stra6O70491 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.53■□□□□ 0.4
Stra6O70491 Gm37153-201ENSMUST00000193637 231 ntBASIC17.53■□□□□ 0.4
Stra6O70491 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.53■□□□□ 0.4
Stra6O70491 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stra6O70491 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stra6O70491 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Stra6O70491 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stra6O70491 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stra6O70491 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
Stra6O70491 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Stra6O70491 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms