Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.72■□□□□ 0.11
Pdlim1O70400 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim1O70400 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim1O70400 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim1O70400 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim1O70400 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim1O70400 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim1O70400 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim1O70400 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim1O70400 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim1O70400 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim1O70400 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim1O70400 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim1O70400 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim1O70400 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Pdlim1O70400 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.71■□□□□ 0.11
Pdlim1O70400 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim1O70400 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.71■□□□□ 0.11
Pdlim1O70400 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.71■□□□□ 0.11
Pdlim1O70400 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.71■□□□□ 0.11
Pdlim1O70400 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.71■□□□□ 0.11
Pdlim1O70400 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.71■□□□□ 0.11
Pdlim1O70400 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim1O70400 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.71■□□□□ 0.11
Pdlim1O70400 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim1O70400 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.71■□□□□ 0.11
Pdlim1O70400 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.71■□□□□ 0.11
Pdlim1O70400 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.71■□□□□ 0.11
Pdlim1O70400 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.71■□□□□ 0.11
Pdlim1O70400 Gm8825-201ENSMUST00000182565 998 ntBASIC15.71■□□□□ 0.11
Pdlim1O70400 Gm4518-201ENSMUST00000182638 718 ntBASIC15.71■□□□□ 0.11
Pdlim1O70400 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.71■□□□□ 0.11
Pdlim1O70400 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.71■□□□□ 0.11
Pdlim1O70400 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.71■□□□□ 0.11
Pdlim1O70400 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.71■□□□□ 0.11
Pdlim1O70400 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim1O70400 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.71■□□□□ 0.11
Pdlim1O70400 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.71■□□□□ 0.11
Pdlim1O70400 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Pdlim1O70400 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim1O70400 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim1O70400 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim1O70400 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim1O70400 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim1O70400 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim1O70400 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim1O70400 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim1O70400 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim1O70400 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pdlim1O70400 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pdlim1O70400 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Pdlim1O70400 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pdlim1O70400 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Pdlim1O70400 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdlim1O70400 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdlim1O70400 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.7■□□□□ 0.1
Pdlim1O70400 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdlim1O70400 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.7■□□□□ 0.1
Pdlim1O70400 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Pdlim1O70400 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.7■□□□□ 0.1
Pdlim1O70400 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdlim1O70400 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdlim1O70400 Gm27459-201ENSMUST00000184860 107 ntBASIC15.7■□□□□ 0.1
Pdlim1O70400 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.7■□□□□ 0.1
Pdlim1O70400 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdlim1O70400 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdlim1O70400 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdlim1O70400 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdlim1O70400 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdlim1O70400 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdlim1O70400 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdlim1O70400 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdlim1O70400 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pdlim1O70400 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Pdlim1O70400 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Pdlim1O70400 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdlim1O70400 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdlim1O70400 Gm7153-201ENSMUST00000117092 455 ntBASIC15.69■□□□□ 0.1
Pdlim1O70400 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Pdlim1O70400 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Pdlim1O70400 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.69■□□□□ 0.1
Pdlim1O70400 Gm8655-201ENSMUST00000221159 852 ntBASIC15.69■□□□□ 0.1
Pdlim1O70400 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.69■□□□□ 0.1
Pdlim1O70400 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.69■□□□□ 0.1
Pdlim1O70400 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdlim1O70400 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.69■□□□□ 0.1
Pdlim1O70400 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.69■□□□□ 0.1
Pdlim1O70400 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pdlim1O70400 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.69■□□□□ 0.1
Pdlim1O70400 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pdlim1O70400 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdlim1O70400 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdlim1O70400 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdlim1O70400 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pdlim1O70400 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pdlim1O70400 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.68■□□□□ 0.1
Pdlim1O70400 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim1O70400 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim1O70400 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim1O70400 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms