Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pja1O55176 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pja1O55176 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pja1O55176 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.84■□□□□ 0.29
Pja1O55176 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.84■□□□□ 0.29
Pja1O55176 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.84■□□□□ 0.29
Pja1O55176 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pja1O55176 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pja1O55176 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Pja1O55176 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pja1O55176 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.84■□□□□ 0.29
Pja1O55176 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pja1O55176 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pja1O55176 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pja1O55176 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pja1O55176 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pja1O55176 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pja1O55176 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pja1O55176 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pja1O55176 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.83■□□□□ 0.28
Pja1O55176 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pja1O55176 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.83■□□□□ 0.28
Pja1O55176 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pja1O55176 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pja1O55176 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pja1O55176 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Pja1O55176 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.83■□□□□ 0.28
Pja1O55176 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Pja1O55176 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pja1O55176 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pja1O55176 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pja1O55176 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Pja1O55176 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.82■□□□□ 0.28
Pja1O55176 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pja1O55176 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pja1O55176 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pja1O55176 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pja1O55176 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.82■□□□□ 0.28
Pja1O55176 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.82■□□□□ 0.28
Pja1O55176 Gm44430-201ENSMUST00000203376 995 ntBASIC16.82■□□□□ 0.28
Pja1O55176 Gm18959-201ENSMUST00000208954 655 ntBASIC16.82■□□□□ 0.28
Pja1O55176 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pja1O55176 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pja1O55176 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pja1O55176 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pja1O55176 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pja1O55176 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pja1O55176 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Pja1O55176 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Pja1O55176 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pja1O55176 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pja1O55176 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pja1O55176 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pja1O55176 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pja1O55176 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pja1O55176 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pja1O55176 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.82■□□□□ 0.28
Pja1O55176 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pja1O55176 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Pja1O55176 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pja1O55176 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pja1O55176 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pja1O55176 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pja1O55176 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pja1O55176 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.81■□□□□ 0.28
Pja1O55176 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pja1O55176 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pja1O55176 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.81■□□□□ 0.28
Pja1O55176 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pja1O55176 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Pja1O55176 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.81■□□□□ 0.28
Pja1O55176 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pja1O55176 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Pja1O55176 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pja1O55176 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pja1O55176 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pja1O55176 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pja1O55176 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pja1O55176 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.8■□□□□ 0.28
Pja1O55176 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pja1O55176 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.8■□□□□ 0.28
Pja1O55176 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pja1O55176 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pja1O55176 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pja1O55176 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.8■□□□□ 0.28
Pja1O55176 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.8■□□□□ 0.28
Pja1O55176 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pja1O55176 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.8■□□□□ 0.28
Pja1O55176 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pja1O55176 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pja1O55176 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pja1O55176 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pja1O55176 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pja1O55176 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pja1O55176 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Pja1O55176 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pja1O55176 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pja1O55176 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pja1O55176 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Pja1O55176 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms