Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rpl35aO55142 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rpl35aO55142 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rpl35aO55142 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rpl35aO55142 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC11.86□□□□□ -0.51
Rpl35aO55142 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpl35aO55142 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpl35aO55142 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC11.86□□□□□ -0.51
Rpl35aO55142 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpl35aO55142 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Rpl35aO55142 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC11.86□□□□□ -0.51
Rpl35aO55142 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpl35aO55142 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Rpl35aO55142 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpl35aO55142 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpl35aO55142 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Rpl35aO55142 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpl35aO55142 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpl35aO55142 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpl35aO55142 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Rpl35aO55142 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpl35aO55142 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Rpl35aO55142 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpl35aO55142 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC11.85□□□□□ -0.51
Rpl35aO55142 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpl35aO55142 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Rpl35aO55142 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpl35aO55142 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rpl35aO55142 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC11.85□□□□□ -0.51
Rpl35aO55142 Gm24589-201ENSMUST00000116692 94 ntBASIC11.85□□□□□ -0.51
Rpl35aO55142 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpl35aO55142 Gm13312-201ENSMUST00000119631 718 ntBASIC11.85□□□□□ -0.51
Rpl35aO55142 Gm14464-201ENSMUST00000119658 1254 ntBASIC11.85□□□□□ -0.51
Rpl35aO55142 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpl35aO55142 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC11.85□□□□□ -0.51
Rpl35aO55142 Gm36967-201ENSMUST00000193814 266 ntBASIC11.85□□□□□ -0.51
Rpl35aO55142 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpl35aO55142 AC108846.1-201ENSMUST00000214531 513 ntBASIC11.85□□□□□ -0.51
Rpl35aO55142 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpl35aO55142 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpl35aO55142 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpl35aO55142 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpl35aO55142 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC11.85□□□□□ -0.51
Rpl35aO55142 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpl35aO55142 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Rpl35aO55142 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpl35aO55142 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpl35aO55142 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpl35aO55142 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpl35aO55142 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpl35aO55142 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rpl35aO55142 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Rpl35aO55142 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpl35aO55142 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Rpl35aO55142 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rpl35aO55142 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC11.84□□□□□ -0.51
Rpl35aO55142 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rpl35aO55142 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rpl35aO55142 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Rpl35aO55142 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rpl35aO55142 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Rpl35aO55142 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rpl35aO55142 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Rpl35aO55142 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rpl35aO55142 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rpl35aO55142 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rpl35aO55142 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rpl35aO55142 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Rpl35aO55142 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rpl35aO55142 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC11.84□□□□□ -0.51
Rpl35aO55142 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rpl35aO55142 Gm27867-201ENSMUST00000184778 125 ntBASIC11.84□□□□□ -0.51
Rpl35aO55142 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC11.84□□□□□ -0.51
Rpl35aO55142 Umpk-ps-201ENSMUST00000211897 827 ntBASIC11.84□□□□□ -0.51
Rpl35aO55142 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC11.84□□□□□ -0.51
Rpl35aO55142 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rpl35aO55142 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rpl35aO55142 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rpl35aO55142 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rpl35aO55142 Gm45774-201ENSMUST00000211992 2665 ntBASIC11.84□□□□□ -0.51
Rpl35aO55142 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rpl35aO55142 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rpl35aO55142 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Rpl35aO55142 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rpl35aO55142 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rpl35aO55142 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rpl35aO55142 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rpl35aO55142 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rpl35aO55142 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Rpl35aO55142 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rpl35aO55142 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC11.84□□□□□ -0.51
Rpl35aO55142 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rpl35aO55142 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC11.84□□□□□ -0.51
Rpl35aO55142 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rpl35aO55142 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC11.84□□□□□ -0.51
Rpl35aO55142 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rpl35aO55142 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rpl35aO55142 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Rpl35aO55142 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Rpl35aO55142 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms