Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Trdmt1O55055 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trdmt1O55055 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC17.49■□□□□ 0.39
Trdmt1O55055 Auts2-212ENSMUST00000178555 309 ntBASIC17.49■□□□□ 0.39
Trdmt1O55055 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.49■□□□□ 0.39
Trdmt1O55055 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC17.49■□□□□ 0.39
Trdmt1O55055 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trdmt1O55055 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trdmt1O55055 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC17.49■□□□□ 0.39
Trdmt1O55055 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trdmt1O55055 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trdmt1O55055 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trdmt1O55055 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trdmt1O55055 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Trdmt1O55055 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trdmt1O55055 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trdmt1O55055 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC17.48■□□□□ 0.39
Trdmt1O55055 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trdmt1O55055 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.48■□□□□ 0.39
Trdmt1O55055 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trdmt1O55055 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trdmt1O55055 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trdmt1O55055 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Trdmt1O55055 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trdmt1O55055 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trdmt1O55055 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trdmt1O55055 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.48■□□□□ 0.39
Trdmt1O55055 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.48■□□□□ 0.39
Trdmt1O55055 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trdmt1O55055 Gm10576-201ENSMUST00000191927 825 ntBASIC17.48■□□□□ 0.39
Trdmt1O55055 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trdmt1O55055 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trdmt1O55055 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trdmt1O55055 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trdmt1O55055 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trdmt1O55055 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trdmt1O55055 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trdmt1O55055 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trdmt1O55055 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trdmt1O55055 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trdmt1O55055 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trdmt1O55055 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trdmt1O55055 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trdmt1O55055 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trdmt1O55055 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trdmt1O55055 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.47■□□□□ 0.39
Trdmt1O55055 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trdmt1O55055 Gm15920-201ENSMUST00000118998 402 ntBASIC17.47■□□□□ 0.39
Trdmt1O55055 Gm11025-201ENSMUST00000140773 466 ntBASIC17.47■□□□□ 0.39
Trdmt1O55055 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trdmt1O55055 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.47■□□□□ 0.39
Trdmt1O55055 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trdmt1O55055 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trdmt1O55055 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trdmt1O55055 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trdmt1O55055 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trdmt1O55055 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trdmt1O55055 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trdmt1O55055 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trdmt1O55055 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trdmt1O55055 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trdmt1O55055 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trdmt1O55055 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trdmt1O55055 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trdmt1O55055 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trdmt1O55055 Gm14701-201ENSMUST00000117156 348 ntBASIC17.46■□□□□ 0.39
Trdmt1O55055 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trdmt1O55055 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.46■□□□□ 0.39
Trdmt1O55055 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.46■□□□□ 0.39
Trdmt1O55055 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trdmt1O55055 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trdmt1O55055 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.46■□□□□ 0.39
Trdmt1O55055 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trdmt1O55055 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trdmt1O55055 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trdmt1O55055 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trdmt1O55055 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.46■□□□□ 0.39
Trdmt1O55055 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trdmt1O55055 Gm13294-201ENSMUST00000121757 1330 ntBASIC17.46■□□□□ 0.38
Trdmt1O55055 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Trdmt1O55055 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Trdmt1O55055 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trdmt1O55055 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trdmt1O55055 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trdmt1O55055 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trdmt1O55055 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trdmt1O55055 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trdmt1O55055 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trdmt1O55055 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trdmt1O55055 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trdmt1O55055 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.45■□□□□ 0.38
Trdmt1O55055 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.45■□□□□ 0.38
Trdmt1O55055 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.45■□□□□ 0.38
Trdmt1O55055 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trdmt1O55055 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trdmt1O55055 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Trdmt1O55055 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.45■□□□□ 0.38
Trdmt1O55055 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trdmt1O55055 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trdmt1O55055 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms