Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prom1O54990 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prom1O54990 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Prom1O54990 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Prom1O54990 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prom1O54990 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prom1O54990 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prom1O54990 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Prom1O54990 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prom1O54990 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prom1O54990 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Prom1O54990 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Prom1O54990 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prom1O54990 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Prom1O54990 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.52■□□□□ 0.4
Prom1O54990 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Prom1O54990 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.52■□□□□ 0.4
Prom1O54990 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Prom1O54990 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prom1O54990 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.4
Prom1O54990 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Prom1O54990 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Prom1O54990 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prom1O54990 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prom1O54990 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prom1O54990 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Prom1O54990 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.52■□□□□ 0.39
Prom1O54990 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Prom1O54990 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Prom1O54990 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Prom1O54990 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Prom1O54990 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Prom1O54990 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prom1O54990 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prom1O54990 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Prom1O54990 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prom1O54990 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prom1O54990 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Prom1O54990 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prom1O54990 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Prom1O54990 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prom1O54990 Gm15358-201ENSMUST00000119249 520 ntBASIC17.51■□□□□ 0.39
Prom1O54990 Gm8344-201ENSMUST00000119813 856 ntBASIC17.51■□□□□ 0.39
Prom1O54990 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prom1O54990 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.51■□□□□ 0.39
Prom1O54990 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Prom1O54990 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prom1O54990 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prom1O54990 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prom1O54990 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prom1O54990 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prom1O54990 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prom1O54990 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Prom1O54990 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prom1O54990 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.5■□□□□ 0.39
Prom1O54990 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
Prom1O54990 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prom1O54990 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Prom1O54990 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prom1O54990 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.5■□□□□ 0.39
Prom1O54990 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Prom1O54990 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.5■□□□□ 0.39
Prom1O54990 AC122024.2-201ENSMUST00000220086 871 ntBASIC17.5■□□□□ 0.39
Prom1O54990 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Prom1O54990 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prom1O54990 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prom1O54990 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prom1O54990 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prom1O54990 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Prom1O54990 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prom1O54990 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prom1O54990 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Prom1O54990 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prom1O54990 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Prom1O54990 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prom1O54990 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Prom1O54990 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Prom1O54990 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prom1O54990 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.49■□□□□ 0.39
Prom1O54990 Gm44492-201ENSMUST00000197012 141 ntBASIC17.49■□□□□ 0.39
Prom1O54990 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prom1O54990 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prom1O54990 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.49■□□□□ 0.39
Prom1O54990 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prom1O54990 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Prom1O54990 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prom1O54990 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prom1O54990 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prom1O54990 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prom1O54990 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Prom1O54990 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prom1O54990 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Prom1O54990 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Prom1O54990 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prom1O54990 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Prom1O54990 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Prom1O54990 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.48■□□□□ 0.39
Prom1O54990 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.48■□□□□ 0.39
Prom1O54990 Gm9682-201ENSMUST00000197505 556 ntBASIC17.48■□□□□ 0.39
Prom1O54990 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms