Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Per2O54943 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Per2O54943 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Per2O54943 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Per2O54943 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Per2O54943 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Per2O54943 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Per2O54943 Gm29518-201ENSMUST00000190858 372 ntBASIC16.63■□□□□ 0.25
Per2O54943 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Per2O54943 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Per2O54943 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
Per2O54943 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Per2O54943 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Per2O54943 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Per2O54943 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Per2O54943 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.63■□□□□ 0.25
Per2O54943 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Per2O54943 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Per2O54943 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Per2O54943 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Per2O54943 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.62■□□□□ 0.25
Per2O54943 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Per2O54943 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Per2O54943 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Per2O54943 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Per2O54943 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Per2O54943 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Per2O54943 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Per2O54943 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.62■□□□□ 0.25
Per2O54943 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Per2O54943 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Per2O54943 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Per2O54943 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Per2O54943 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Per2O54943 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Per2O54943 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Per2O54943 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Per2O54943 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Per2O54943 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Per2O54943 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Per2O54943 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Per2O54943 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Per2O54943 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Per2O54943 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Per2O54943 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Per2O54943 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Per2O54943 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Per2O54943 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Per2O54943 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Per2O54943 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Per2O54943 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Per2O54943 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Per2O54943 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Per2O54943 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Per2O54943 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Per2O54943 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Per2O54943 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Per2O54943 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Per2O54943 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Per2O54943 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Per2O54943 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Per2O54943 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Per2O54943 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Per2O54943 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.61■□□□□ 0.25
Per2O54943 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Per2O54943 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Per2O54943 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Per2O54943 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Per2O54943 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Per2O54943 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Per2O54943 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Per2O54943 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Per2O54943 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Per2O54943 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Per2O54943 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Per2O54943 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.6■□□□□ 0.25
Per2O54943 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Per2O54943 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Per2O54943 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Per2O54943 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Per2O54943 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.6■□□□□ 0.25
Per2O54943 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Per2O54943 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Per2O54943 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Per2O54943 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Per2O54943 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Per2O54943 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Per2O54943 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Per2O54943 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Per2O54943 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Per2O54943 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.59■□□□□ 0.25
Per2O54943 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Per2O54943 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Per2O54943 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Per2O54943 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Per2O54943 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Per2O54943 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Per2O54943 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Per2O54943 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Per2O54943 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms