Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccr6O54689 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccr6O54689 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.42□□□□□ -0.26
Ccr6O54689 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccr6O54689 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.42□□□□□ -0.26
Ccr6O54689 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccr6O54689 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccr6O54689 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccr6O54689 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.42□□□□□ -0.26
Ccr6O54689 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccr6O54689 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccr6O54689 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccr6O54689 Gm12896-201ENSMUST00000118430 226 ntBASIC13.42□□□□□ -0.26
Ccr6O54689 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccr6O54689 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccr6O54689 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ccr6O54689 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ccr6O54689 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccr6O54689 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.42□□□□□ -0.26
Ccr6O54689 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ccr6O54689 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccr6O54689 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccr6O54689 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccr6O54689 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccr6O54689 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccr6O54689 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ccr6O54689 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccr6O54689 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccr6O54689 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccr6O54689 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Ccr6O54689 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.41□□□□□ -0.26
Ccr6O54689 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.41□□□□□ -0.26
Ccr6O54689 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccr6O54689 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccr6O54689 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccr6O54689 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC13.41□□□□□ -0.26
Ccr6O54689 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC13.41□□□□□ -0.26
Ccr6O54689 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Ccr6O54689 Gm43183-201ENSMUST00000200632 547 ntBASIC13.41□□□□□ -0.26
Ccr6O54689 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccr6O54689 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccr6O54689 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.41□□□□□ -0.26
Ccr6O54689 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccr6O54689 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccr6O54689 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccr6O54689 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccr6O54689 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccr6O54689 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Ccr6O54689 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccr6O54689 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccr6O54689 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccr6O54689 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccr6O54689 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.4□□□□□ -0.26
Ccr6O54689 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Ccr6O54689 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccr6O54689 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccr6O54689 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccr6O54689 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccr6O54689 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC13.4□□□□□ -0.26
Ccr6O54689 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccr6O54689 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccr6O54689 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.4□□□□□ -0.26
Ccr6O54689 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Ccr6O54689 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccr6O54689 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.4□□□□□ -0.26
Ccr6O54689 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccr6O54689 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccr6O54689 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Ccr6O54689 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccr6O54689 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccr6O54689 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccr6O54689 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccr6O54689 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccr6O54689 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccr6O54689 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Ccr6O54689 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccr6O54689 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccr6O54689 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ccr6O54689 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.39□□□□□ -0.27
Ccr6O54689 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccr6O54689 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
Ccr6O54689 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.39□□□□□ -0.27
Ccr6O54689 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccr6O54689 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ccr6O54689 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.39□□□□□ -0.27
Ccr6O54689 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccr6O54689 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Ccr6O54689 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.39□□□□□ -0.27
Ccr6O54689 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ccr6O54689 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ccr6O54689 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.39□□□□□ -0.27
Ccr6O54689 Gm18115-201ENSMUST00000221209 621 ntBASIC13.39□□□□□ -0.27
Ccr6O54689 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccr6O54689 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccr6O54689 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccr6O54689 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ccr6O54689 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ccr6O54689 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccr6O54689 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ccr6O54689 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms