Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Gm13474-201ENSMUST00000122466 815 ntBASIC15.73■□□□□ 0.11
Slc1a6O35544 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc1a6O35544 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Slc1a6O35544 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.73■□□□□ 0.11
Slc1a6O35544 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC15.73■□□□□ 0.11
Slc1a6O35544 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc1a6O35544 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc1a6O35544 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.73■□□□□ 0.11
Slc1a6O35544 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc1a6O35544 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Slc1a6O35544 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc1a6O35544 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Slc1a6O35544 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Slc1a6O35544 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc1a6O35544 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc1a6O35544 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc1a6O35544 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.72■□□□□ 0.11
Slc1a6O35544 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc1a6O35544 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Slc1a6O35544 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc1a6O35544 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc1a6O35544 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc1a6O35544 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Slc1a6O35544 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc1a6O35544 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Slc1a6O35544 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc1a6O35544 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Slc1a6O35544 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc1a6O35544 Gm13168-201ENSMUST00000121771 632 ntBASIC15.72■□□□□ 0.11
Slc1a6O35544 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Slc1a6O35544 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.72■□□□□ 0.11
Slc1a6O35544 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc1a6O35544 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc1a6O35544 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc1a6O35544 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc1a6O35544 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc1a6O35544 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc1a6O35544 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc1a6O35544 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc1a6O35544 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc1a6O35544 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Slc1a6O35544 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc1a6O35544 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Slc1a6O35544 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.72■□□□□ 0.11
Slc1a6O35544 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc1a6O35544 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc1a6O35544 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Slc1a6O35544 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.71■□□□□ 0.11
Slc1a6O35544 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Slc1a6O35544 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.71■□□□□ 0.11
Slc1a6O35544 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc1a6O35544 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Slc1a6O35544 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Slc1a6O35544 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc1a6O35544 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc1a6O35544 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Slc1a6O35544 Gm10653-202ENSMUST00000139570 835 ntBASIC15.71■□□□□ 0.11
Slc1a6O35544 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
Slc1a6O35544 Gm29257-201ENSMUST00000186115 639 ntBASIC15.71■□□□□ 0.11
Slc1a6O35544 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.71■□□□□ 0.11
Slc1a6O35544 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc1a6O35544 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Slc1a6O35544 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc1a6O35544 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc1a6O35544 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc1a6O35544 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Slc1a6O35544 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Slc1a6O35544 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc1a6O35544 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Slc1a6O35544 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Slc1a6O35544 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Slc1a6O35544 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc1a6O35544 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Slc1a6O35544 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc1a6O35544 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Slc1a6O35544 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.7■□□□□ 0.1
Slc1a6O35544 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Slc1a6O35544 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc1a6O35544 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc1a6O35544 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc1a6O35544 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc1a6O35544 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc1a6O35544 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc1a6O35544 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc1a6O35544 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc1a6O35544 Gm16061-201ENSMUST00000122167 857 ntBASIC15.7■□□□□ 0.1
Slc1a6O35544 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Slc1a6O35544 Mir5122-201ENSMUST00000175004 89 ntBASIC15.7■□□□□ 0.1
Slc1a6O35544 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc1a6O35544 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc1a6O35544 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc1a6O35544 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.7■□□□□ 0.1
Slc1a6O35544 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.7■□□□□ 0.1
Slc1a6O35544 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc1a6O35544 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc1a6O35544 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Slc1a6O35544 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc1a6O35544 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Slc1a6O35544 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc1a6O35544 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms