Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clcn6O35454 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Clcn6O35454 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Clcn6O35454 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clcn6O35454 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.17■□□□□ 0.34
Clcn6O35454 Gm18597-201ENSMUST00000209519 694 ntBASIC17.17■□□□□ 0.34
Clcn6O35454 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clcn6O35454 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Clcn6O35454 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clcn6O35454 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Clcn6O35454 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clcn6O35454 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.17■□□□□ 0.34
Clcn6O35454 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clcn6O35454 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Clcn6O35454 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clcn6O35454 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.17■□□□□ 0.34
Clcn6O35454 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.17■□□□□ 0.34
Clcn6O35454 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clcn6O35454 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clcn6O35454 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clcn6O35454 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clcn6O35454 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Clcn6O35454 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Clcn6O35454 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.16■□□□□ 0.34
Clcn6O35454 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clcn6O35454 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clcn6O35454 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Clcn6O35454 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clcn6O35454 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clcn6O35454 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clcn6O35454 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Clcn6O35454 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Clcn6O35454 Gm12372-201ENSMUST00000121654 768 ntBASIC17.16■□□□□ 0.34
Clcn6O35454 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC17.16■□□□□ 0.34
Clcn6O35454 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.16■□□□□ 0.34
Clcn6O35454 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Clcn6O35454 Gm42836-201ENSMUST00000197198 728 ntTSL 5 BASIC17.16■□□□□ 0.34
Clcn6O35454 Gm45525-201ENSMUST00000210800 389 ntBASIC17.16■□□□□ 0.34
Clcn6O35454 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Clcn6O35454 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clcn6O35454 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clcn6O35454 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clcn6O35454 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clcn6O35454 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clcn6O35454 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Clcn6O35454 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Clcn6O35454 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.16■□□□□ 0.34
Clcn6O35454 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
Clcn6O35454 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clcn6O35454 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn6O35454 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.15■□□□□ 0.34
Clcn6O35454 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn6O35454 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn6O35454 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Clcn6O35454 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn6O35454 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn6O35454 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn6O35454 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn6O35454 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn6O35454 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn6O35454 Gm37055-201ENSMUST00000191866 133 ntBASIC17.15■□□□□ 0.34
Clcn6O35454 Gm36982-201ENSMUST00000193796 1128 ntBASIC17.15■□□□□ 0.34
Clcn6O35454 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.15■□□□□ 0.34
Clcn6O35454 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Clcn6O35454 Gm36287-201ENSMUST00000223481 796 ntTSL 5 BASIC17.15■□□□□ 0.34
Clcn6O35454 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn6O35454 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn6O35454 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Clcn6O35454 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn6O35454 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn6O35454 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn6O35454 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn6O35454 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Clcn6O35454 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn6O35454 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn6O35454 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Clcn6O35454 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
Clcn6O35454 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Clcn6O35454 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.14■□□□□ 0.33
Clcn6O35454 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Clcn6O35454 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn6O35454 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn6O35454 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn6O35454 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC17.14■□□□□ 0.33
Clcn6O35454 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
Clcn6O35454 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.14■□□□□ 0.33
Clcn6O35454 Gm43794-201ENSMUST00000200971 692 ntBASIC17.14■□□□□ 0.33
Clcn6O35454 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn6O35454 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn6O35454 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Clcn6O35454 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn6O35454 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Clcn6O35454 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Clcn6O35454 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn6O35454 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.14■□□□□ 0.33
Clcn6O35454 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn6O35454 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn6O35454 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn6O35454 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn6O35454 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms