Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trove2O08848 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trove2O08848 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trove2O08848 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Trove2O08848 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trove2O08848 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trove2O08848 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.4■□□□□ 0.22
Trove2O08848 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trove2O08848 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.22
Trove2O08848 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trove2O08848 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trove2O08848 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trove2O08848 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trove2O08848 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trove2O08848 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trove2O08848 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trove2O08848 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trove2O08848 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trove2O08848 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Trove2O08848 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trove2O08848 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trove2O08848 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trove2O08848 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trove2O08848 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.39■□□□□ 0.21
Trove2O08848 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Trove2O08848 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trove2O08848 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trove2O08848 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.39■□□□□ 0.21
Trove2O08848 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trove2O08848 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.39■□□□□ 0.21
Trove2O08848 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trove2O08848 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trove2O08848 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trove2O08848 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trove2O08848 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trove2O08848 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
Trove2O08848 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trove2O08848 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trove2O08848 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Trove2O08848 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.39■□□□□ 0.21
Trove2O08848 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.39■□□□□ 0.21
Trove2O08848 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trove2O08848 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.38■□□□□ 0.21
Trove2O08848 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trove2O08848 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trove2O08848 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trove2O08848 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trove2O08848 Gm27000-201ENSMUST00000182943 842 ntBASIC16.38■□□□□ 0.21
Trove2O08848 Gm37055-201ENSMUST00000191866 133 ntBASIC16.38■□□□□ 0.21
Trove2O08848 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trove2O08848 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trove2O08848 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trove2O08848 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trove2O08848 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trove2O08848 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trove2O08848 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trove2O08848 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trove2O08848 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trove2O08848 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trove2O08848 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trove2O08848 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trove2O08848 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trove2O08848 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trove2O08848 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.38■□□□□ 0.21
Trove2O08848 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trove2O08848 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trove2O08848 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trove2O08848 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trove2O08848 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trove2O08848 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trove2O08848 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trove2O08848 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.37■□□□□ 0.21
Trove2O08848 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.37■□□□□ 0.21
Trove2O08848 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trove2O08848 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.37■□□□□ 0.21
Trove2O08848 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trove2O08848 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trove2O08848 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trove2O08848 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trove2O08848 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trove2O08848 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trove2O08848 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trove2O08848 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trove2O08848 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Trove2O08848 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trove2O08848 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Trove2O08848 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trove2O08848 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trove2O08848 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.36■□□□□ 0.21
Trove2O08848 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trove2O08848 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trove2O08848 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trove2O08848 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trove2O08848 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trove2O08848 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trove2O08848 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trove2O08848 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trove2O08848 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Trove2O08848 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.36■□□□□ 0.21
Trove2O08848 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms