Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tcof1O08784 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tcof1O08784 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tcof1O08784 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tcof1O08784 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tcof1O08784 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tcof1O08784 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Tcof1O08784 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tcof1O08784 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tcof1O08784 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tcof1O08784 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Tcof1O08784 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tcof1O08784 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tcof1O08784 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tcof1O08784 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tcof1O08784 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tcof1O08784 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.6■□□□□ 0.57
Tcof1O08784 Gm7862-201ENSMUST00000121461 292 ntBASIC18.6■□□□□ 0.57
Tcof1O08784 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.6■□□□□ 0.57
Tcof1O08784 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.6■□□□□ 0.57
Tcof1O08784 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tcof1O08784 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tcof1O08784 Gm5867-201ENSMUST00000063197 592 ntBASIC18.6■□□□□ 0.57
Tcof1O08784 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tcof1O08784 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.6■□□□□ 0.57
Tcof1O08784 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tcof1O08784 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tcof1O08784 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tcof1O08784 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tcof1O08784 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.6■□□□□ 0.57
Tcof1O08784 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Tcof1O08784 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tcof1O08784 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.59■□□□□ 0.57
Tcof1O08784 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tcof1O08784 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tcof1O08784 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tcof1O08784 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tcof1O08784 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tcof1O08784 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tcof1O08784 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tcof1O08784 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tcof1O08784 Gm13418-201ENSMUST00000119097 944 ntBASIC18.59■□□□□ 0.57
Tcof1O08784 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.59■□□□□ 0.57
Tcof1O08784 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.59■□□□□ 0.57
Tcof1O08784 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Tcof1O08784 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tcof1O08784 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tcof1O08784 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tcof1O08784 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.59■□□□□ 0.57
Tcof1O08784 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tcof1O08784 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Tcof1O08784 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tcof1O08784 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tcof1O08784 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Tcof1O08784 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tcof1O08784 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tcof1O08784 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tcof1O08784 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tcof1O08784 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tcof1O08784 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Tcof1O08784 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tcof1O08784 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tcof1O08784 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.58■□□□□ 0.57
Tcof1O08784 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Tcof1O08784 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.58■□□□□ 0.57
Tcof1O08784 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.58■□□□□ 0.57
Tcof1O08784 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Tcof1O08784 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.58■□□□□ 0.57
Tcof1O08784 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.58■□□□□ 0.57
Tcof1O08784 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tcof1O08784 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Tcof1O08784 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Tcof1O08784 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.58■□□□□ 0.56
Tcof1O08784 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Tcof1O08784 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tcof1O08784 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tcof1O08784 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
Tcof1O08784 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.58■□□□□ 0.56
Tcof1O08784 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tcof1O08784 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.58■□□□□ 0.56
Tcof1O08784 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tcof1O08784 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tcof1O08784 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tcof1O08784 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tcof1O08784 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tcof1O08784 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tcof1O08784 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.57■□□□□ 0.56
Tcof1O08784 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tcof1O08784 Gm4535-201ENSMUST00000182274 558 ntBASIC18.57■□□□□ 0.56
Tcof1O08784 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.57■□□□□ 0.56
Tcof1O08784 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC18.57■□□□□ 0.56
Tcof1O08784 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.57■□□□□ 0.56
Tcof1O08784 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tcof1O08784 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Tcof1O08784 Gm10355-201ENSMUST00000097146 517 ntBASIC18.57■□□□□ 0.56
Tcof1O08784 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.57■□□□□ 0.56
Tcof1O08784 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.57■□□□□ 0.56
Tcof1O08784 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.57■□□□□ 0.56
Tcof1O08784 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Tcof1O08784 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms