Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ube3aO08759 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ube3aO08759 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ube3aO08759 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ube3aO08759 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ube3aO08759 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ube3aO08759 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ube3aO08759 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ube3aO08759 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ube3aO08759 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ube3aO08759 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ube3aO08759 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ube3aO08759 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ube3aO08759 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ube3aO08759 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ube3aO08759 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ube3aO08759 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ube3aO08759 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ube3aO08759 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ube3aO08759 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ube3aO08759 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ube3aO08759 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ube3aO08759 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ube3aO08759 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube3aO08759 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube3aO08759 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube3aO08759 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ube3aO08759 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube3aO08759 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube3aO08759 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ube3aO08759 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube3aO08759 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube3aO08759 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube3aO08759 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.25■□□□□ 0.35
Ube3aO08759 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.25■□□□□ 0.35
Ube3aO08759 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube3aO08759 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube3aO08759 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ube3aO08759 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Ube3aO08759 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.25■□□□□ 0.35
Ube3aO08759 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.25■□□□□ 0.35
Ube3aO08759 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.25■□□□□ 0.35
Ube3aO08759 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ube3aO08759 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.25■□□□□ 0.35
Ube3aO08759 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.25■□□□□ 0.35
Ube3aO08759 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.25■□□□□ 0.35
Ube3aO08759 Gm5417-201ENSMUST00000079706 384 ntBASIC17.25■□□□□ 0.35
Ube3aO08759 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube3aO08759 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ube3aO08759 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.25■□□□□ 0.35
Ube3aO08759 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube3aO08759 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.25■□□□□ 0.35
Ube3aO08759 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube3aO08759 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube3aO08759 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube3aO08759 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube3aO08759 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3aO08759 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3aO08759 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3aO08759 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3aO08759 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3aO08759 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.24■□□□□ 0.35
Ube3aO08759 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3aO08759 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3aO08759 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3aO08759 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.24■□□□□ 0.35
Ube3aO08759 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.24■□□□□ 0.35
Ube3aO08759 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.24■□□□□ 0.35
Ube3aO08759 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.24■□□□□ 0.35
Ube3aO08759 Gm21814-202ENSMUST00000203277 873 ntBASIC17.24■□□□□ 0.35
Ube3aO08759 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.24■□□□□ 0.35
Ube3aO08759 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.24■□□□□ 0.35
Ube3aO08759 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3aO08759 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3aO08759 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3aO08759 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3aO08759 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.24■□□□□ 0.35
Ube3aO08759 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3aO08759 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.24■□□□□ 0.35
Ube3aO08759 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3aO08759 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3aO08759 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Ube3aO08759 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3aO08759 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3aO08759 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3aO08759 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3aO08759 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3aO08759 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3aO08759 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ube3aO08759 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3aO08759 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3aO08759 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3aO08759 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.23■□□□□ 0.35
Ube3aO08759 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3aO08759 Gm29707-201ENSMUST00000196325 491 ntBASIC17.23■□□□□ 0.35
Ube3aO08759 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3aO08759 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ube3aO08759 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3aO08759 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3aO08759 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms