Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim34bJ3QNR8 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Trim34bJ3QNR8 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim34bJ3QNR8 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Trim34bJ3QNR8 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim34bJ3QNR8 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim34bJ3QNR8 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim34bJ3QNR8 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim34bJ3QNR8 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim34bJ3QNR8 Gm14494-201ENSMUST00000118786 435 ntBASIC19.44■□□□□ 0.7
Trim34bJ3QNR8 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC19.44■□□□□ 0.7
Trim34bJ3QNR8 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim34bJ3QNR8 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC19.44■□□□□ 0.7
Trim34bJ3QNR8 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim34bJ3QNR8 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim34bJ3QNR8 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC19.44■□□□□ 0.7
Trim34bJ3QNR8 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim34bJ3QNR8 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Trim34bJ3QNR8 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim34bJ3QNR8 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim34bJ3QNR8 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim34bJ3QNR8 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Trim34bJ3QNR8 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC19.43■□□□□ 0.7
Trim34bJ3QNR8 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim34bJ3QNR8 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim34bJ3QNR8 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim34bJ3QNR8 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim34bJ3QNR8 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.43■□□□□ 0.7
Trim34bJ3QNR8 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim34bJ3QNR8 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Trim34bJ3QNR8 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim34bJ3QNR8 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim34bJ3QNR8 Gm37153-201ENSMUST00000193637 231 ntBASIC19.43■□□□□ 0.7
Trim34bJ3QNR8 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Trim34bJ3QNR8 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim34bJ3QNR8 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim34bJ3QNR8 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim34bJ3QNR8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.43■□□□□ 0.7
Trim34bJ3QNR8 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim34bJ3QNR8 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim34bJ3QNR8 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC19.43■□□□□ 0.7
Trim34bJ3QNR8 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim34bJ3QNR8 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim34bJ3QNR8 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim34bJ3QNR8 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Trim34bJ3QNR8 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Trim34bJ3QNR8 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Trim34bJ3QNR8 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim34bJ3QNR8 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim34bJ3QNR8 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim34bJ3QNR8 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.42■□□□□ 0.7
Trim34bJ3QNR8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim34bJ3QNR8 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim34bJ3QNR8 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim34bJ3QNR8 Gm15358-201ENSMUST00000119249 520 ntBASIC19.42■□□□□ 0.7
Trim34bJ3QNR8 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC19.42■□□□□ 0.7
Trim34bJ3QNR8 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC19.42■□□□□ 0.7
Trim34bJ3QNR8 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim34bJ3QNR8 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC19.42■□□□□ 0.7
Trim34bJ3QNR8 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim34bJ3QNR8 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim34bJ3QNR8 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim34bJ3QNR8 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim34bJ3QNR8 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Trim34bJ3QNR8 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim34bJ3QNR8 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Trim34bJ3QNR8 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim34bJ3QNR8 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim34bJ3QNR8 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim34bJ3QNR8 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim34bJ3QNR8 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim34bJ3QNR8 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim34bJ3QNR8 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim34bJ3QNR8 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim34bJ3QNR8 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Trim34bJ3QNR8 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim34bJ3QNR8 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC19.41■□□□□ 0.7
Trim34bJ3QNR8 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim34bJ3QNR8 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC19.41■□□□□ 0.7
Trim34bJ3QNR8 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC19.41■□□□□ 0.7
Trim34bJ3QNR8 Gm45683-201ENSMUST00000210825 1247 ntBASIC19.41■□□□□ 0.7
Trim34bJ3QNR8 AC090659.1-201ENSMUST00000224334 768 ntBASIC19.41■□□□□ 0.7
Trim34bJ3QNR8 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim34bJ3QNR8 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Trim34bJ3QNR8 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim34bJ3QNR8 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim34bJ3QNR8 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim34bJ3QNR8 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim34bJ3QNR8 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim34bJ3QNR8 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim34bJ3QNR8 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim34bJ3QNR8 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim34bJ3QNR8 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim34bJ3QNR8 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Trim34bJ3QNR8 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC19.4■□□□□ 0.7
Trim34bJ3QNR8 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Trim34bJ3QNR8 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim34bJ3QNR8 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim34bJ3QNR8 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim34bJ3QNR8 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms