Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sgo2bJ3QMK1 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sgo2bJ3QMK1 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sgo2bJ3QMK1 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
Sgo2bJ3QMK1 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sgo2bJ3QMK1 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sgo2bJ3QMK1 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Sgo2bJ3QMK1 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sgo2bJ3QMK1 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sgo2bJ3QMK1 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sgo2bJ3QMK1 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sgo2bJ3QMK1 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sgo2bJ3QMK1 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sgo2bJ3QMK1 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sgo2bJ3QMK1 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Sgo2bJ3QMK1 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sgo2bJ3QMK1 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sgo2bJ3QMK1 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sgo2bJ3QMK1 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sgo2bJ3QMK1 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sgo2bJ3QMK1 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.91■□□□□ 0.14
Sgo2bJ3QMK1 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sgo2bJ3QMK1 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sgo2bJ3QMK1 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sgo2bJ3QMK1 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Sgo2bJ3QMK1 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sgo2bJ3QMK1 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sgo2bJ3QMK1 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sgo2bJ3QMK1 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sgo2bJ3QMK1 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sgo2bJ3QMK1 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sgo2bJ3QMK1 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.9■□□□□ 0.14
Sgo2bJ3QMK1 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sgo2bJ3QMK1 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sgo2bJ3QMK1 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sgo2bJ3QMK1 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.9■□□□□ 0.14
Sgo2bJ3QMK1 Gm25016-201ENSMUST00000158399 131 ntBASIC15.9■□□□□ 0.14
Sgo2bJ3QMK1 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.9■□□□□ 0.14
Sgo2bJ3QMK1 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sgo2bJ3QMK1 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.9■□□□□ 0.14
Sgo2bJ3QMK1 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sgo2bJ3QMK1 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sgo2bJ3QMK1 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Sgo2bJ3QMK1 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Sgo2bJ3QMK1 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.9■□□□□ 0.14
Sgo2bJ3QMK1 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sgo2bJ3QMK1 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sgo2bJ3QMK1 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sgo2bJ3QMK1 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sgo2bJ3QMK1 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sgo2bJ3QMK1 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sgo2bJ3QMK1 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sgo2bJ3QMK1 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sgo2bJ3QMK1 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sgo2bJ3QMK1 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sgo2bJ3QMK1 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sgo2bJ3QMK1 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sgo2bJ3QMK1 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.89■□□□□ 0.13
Sgo2bJ3QMK1 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sgo2bJ3QMK1 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sgo2bJ3QMK1 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sgo2bJ3QMK1 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.89■□□□□ 0.13
Sgo2bJ3QMK1 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Sgo2bJ3QMK1 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sgo2bJ3QMK1 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Sgo2bJ3QMK1 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Sgo2bJ3QMK1 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sgo2bJ3QMK1 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sgo2bJ3QMK1 AA414768-201ENSMUST00000121924 1257 ntBASIC15.89■□□□□ 0.13
Sgo2bJ3QMK1 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sgo2bJ3QMK1 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.89■□□□□ 0.13
Sgo2bJ3QMK1 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
Sgo2bJ3QMK1 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.89■□□□□ 0.13
Sgo2bJ3QMK1 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Sgo2bJ3QMK1 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.89■□□□□ 0.13
Sgo2bJ3QMK1 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sgo2bJ3QMK1 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sgo2bJ3QMK1 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sgo2bJ3QMK1 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Sgo2bJ3QMK1 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sgo2bJ3QMK1 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.89■□□□□ 0.13
Sgo2bJ3QMK1 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sgo2bJ3QMK1 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sgo2bJ3QMK1 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sgo2bJ3QMK1 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sgo2bJ3QMK1 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Sgo2bJ3QMK1 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sgo2bJ3QMK1 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sgo2bJ3QMK1 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sgo2bJ3QMK1 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sgo2bJ3QMK1 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sgo2bJ3QMK1 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Sgo2bJ3QMK1 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Sgo2bJ3QMK1 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sgo2bJ3QMK1 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sgo2bJ3QMK1 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Sgo2bJ3QMK1 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sgo2bJ3QMK1 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sgo2bJ3QMK1 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sgo2bJ3QMK1 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms