Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh1F7BJK1 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh1F7BJK1 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Pcdh1F7BJK1 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh1F7BJK1 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pcdh1F7BJK1 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Pcdh1F7BJK1 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Pcdh1F7BJK1 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdh1F7BJK1 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdh1F7BJK1 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh1F7BJK1 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh1F7BJK1 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh1F7BJK1 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Pcdh1F7BJK1 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh1F7BJK1 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh1F7BJK1 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdh1F7BJK1 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh1F7BJK1 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.37□□□□□ -0.11
Pcdh1F7BJK1 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdh1F7BJK1 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Pcdh1F7BJK1 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh1F7BJK1 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh1F7BJK1 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh1F7BJK1 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Pcdh1F7BJK1 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdh1F7BJK1 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh1F7BJK1 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh1F7BJK1 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh1F7BJK1 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdh1F7BJK1 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh1F7BJK1 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh1F7BJK1 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Pcdh1F7BJK1 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdh1F7BJK1 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh1F7BJK1 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdh1F7BJK1 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh1F7BJK1 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh1F7BJK1 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh1F7BJK1 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh1F7BJK1 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh1F7BJK1 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh1F7BJK1 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh1F7BJK1 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh1F7BJK1 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh1F7BJK1 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh1F7BJK1 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh1F7BJK1 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdh1F7BJK1 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh1F7BJK1 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.36□□□□□ -0.11
Pcdh1F7BJK1 Gm10566-201ENSMUST00000086739 996 ntBASIC14.36□□□□□ -0.11
Pcdh1F7BJK1 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh1F7BJK1 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Pcdh1F7BJK1 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh1F7BJK1 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh1F7BJK1 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Pcdh1F7BJK1 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.36□□□□□ -0.11
Pcdh1F7BJK1 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh1F7BJK1 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh1F7BJK1 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh1F7BJK1 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh1F7BJK1 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh1F7BJK1 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Pcdh1F7BJK1 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh1F7BJK1 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh1F7BJK1 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh1F7BJK1 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh1F7BJK1 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdh1F7BJK1 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh1F7BJK1 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh1F7BJK1 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh1F7BJK1 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh1F7BJK1 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh1F7BJK1 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh1F7BJK1 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.35□□□□□ -0.11
Pcdh1F7BJK1 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Pcdh1F7BJK1 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh1F7BJK1 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.35□□□□□ -0.11
Pcdh1F7BJK1 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh1F7BJK1 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh1F7BJK1 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh1F7BJK1 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh1F7BJK1 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh1F7BJK1 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh1F7BJK1 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh1F7BJK1 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Pcdh1F7BJK1 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh1F7BJK1 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh1F7BJK1 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh1F7BJK1 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh1F7BJK1 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh1F7BJK1 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh1F7BJK1 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.34□□□□□ -0.11
Pcdh1F7BJK1 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh1F7BJK1 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh1F7BJK1 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh1F7BJK1 BC037039-201ENSMUST00000192003 2205 ntBASIC14.34□□□□□ -0.11
Pcdh1F7BJK1 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh1F7BJK1 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh1F7BJK1 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh1F7BJK1 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms