Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TprF6ZDS4 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TprF6ZDS4 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TprF6ZDS4 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TprF6ZDS4 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.59□□□□□ -0.07
TprF6ZDS4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TprF6ZDS4 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TprF6ZDS4 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TprF6ZDS4 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TprF6ZDS4 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.59□□□□□ -0.07
TprF6ZDS4 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.59□□□□□ -0.07
TprF6ZDS4 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TprF6ZDS4 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TprF6ZDS4 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TprF6ZDS4 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
TprF6ZDS4 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TprF6ZDS4 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TprF6ZDS4 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TprF6ZDS4 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.59□□□□□ -0.07
TprF6ZDS4 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TprF6ZDS4 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TprF6ZDS4 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TprF6ZDS4 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
TprF6ZDS4 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TprF6ZDS4 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TprF6ZDS4 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TprF6ZDS4 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.59□□□□□ -0.07
TprF6ZDS4 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.58□□□□□ -0.07
TprF6ZDS4 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.58□□□□□ -0.07
TprF6ZDS4 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.58□□□□□ -0.07
TprF6ZDS4 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.58□□□□□ -0.07
TprF6ZDS4 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
TprF6ZDS4 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.58□□□□□ -0.07
TprF6ZDS4 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TprF6ZDS4 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TprF6ZDS4 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TprF6ZDS4 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TprF6ZDS4 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TprF6ZDS4 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.58□□□□□ -0.08
TprF6ZDS4 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TprF6ZDS4 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TprF6ZDS4 Gm7653-201ENSMUST00000214567 508 ntBASIC14.58□□□□□ -0.08
TprF6ZDS4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TprF6ZDS4 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TprF6ZDS4 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
TprF6ZDS4 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TprF6ZDS4 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
TprF6ZDS4 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TprF6ZDS4 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TprF6ZDS4 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TprF6ZDS4 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
TprF6ZDS4 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TprF6ZDS4 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TprF6ZDS4 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TprF6ZDS4 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TprF6ZDS4 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.57□□□□□ -0.08
TprF6ZDS4 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TprF6ZDS4 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TprF6ZDS4 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TprF6ZDS4 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TprF6ZDS4 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TprF6ZDS4 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TprF6ZDS4 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TprF6ZDS4 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TprF6ZDS4 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TprF6ZDS4 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TprF6ZDS4 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TprF6ZDS4 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TprF6ZDS4 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TprF6ZDS4 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
TprF6ZDS4 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TprF6ZDS4 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TprF6ZDS4 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TprF6ZDS4 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
TprF6ZDS4 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.57□□□□□ -0.08
TprF6ZDS4 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
TprF6ZDS4 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
TprF6ZDS4 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TprF6ZDS4 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TprF6ZDS4 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TprF6ZDS4 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TprF6ZDS4 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TprF6ZDS4 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.57□□□□□ -0.08
TprF6ZDS4 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TprF6ZDS4 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TprF6ZDS4 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TprF6ZDS4 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TprF6ZDS4 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TprF6ZDS4 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TprF6ZDS4 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC14.56□□□□□ -0.08
TprF6ZDS4 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TprF6ZDS4 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TprF6ZDS4 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TprF6ZDS4 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TprF6ZDS4 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TprF6ZDS4 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TprF6ZDS4 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TprF6ZDS4 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TprF6ZDS4 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TprF6ZDS4 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms