Protein–RNA interactions for Protein: F6V0H0

Pagr1b, PAXIP1-associated glutamate-rich protein 1B (Fragment), mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pagr1bF6V0H0 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pagr1bF6V0H0 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pagr1bF6V0H0 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pagr1bF6V0H0 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pagr1bF6V0H0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pagr1bF6V0H0 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.32■□□□□ 0.52
Pagr1bF6V0H0 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pagr1bF6V0H0 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Pagr1bF6V0H0 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Pagr1bF6V0H0 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Pagr1bF6V0H0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pagr1bF6V0H0 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Pagr1bF6V0H0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pagr1bF6V0H0 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
Pagr1bF6V0H0 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pagr1bF6V0H0 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pagr1bF6V0H0 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.31■□□□□ 0.52
Pagr1bF6V0H0 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC18.31■□□□□ 0.52
Pagr1bF6V0H0 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pagr1bF6V0H0 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pagr1bF6V0H0 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pagr1bF6V0H0 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Pagr1bF6V0H0 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Pagr1bF6V0H0 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.31■□□□□ 0.52
Pagr1bF6V0H0 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Pagr1bF6V0H0 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Pagr1bF6V0H0 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pagr1bF6V0H0 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pagr1bF6V0H0 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pagr1bF6V0H0 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.3■□□□□ 0.52
Pagr1bF6V0H0 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pagr1bF6V0H0 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pagr1bF6V0H0 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.3■□□□□ 0.52
Pagr1bF6V0H0 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.3■□□□□ 0.52
Pagr1bF6V0H0 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pagr1bF6V0H0 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pagr1bF6V0H0 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pagr1bF6V0H0 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pagr1bF6V0H0 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Pagr1bF6V0H0 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC18.3■□□□□ 0.52
Pagr1bF6V0H0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pagr1bF6V0H0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pagr1bF6V0H0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Pagr1bF6V0H0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pagr1bF6V0H0 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pagr1bF6V0H0 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pagr1bF6V0H0 Grk6-207ENSMUST00000225925 2769 ntBASIC18.3■□□□□ 0.52
Pagr1bF6V0H0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pagr1bF6V0H0 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Pagr1bF6V0H0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Pagr1bF6V0H0 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
Pagr1bF6V0H0 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pagr1bF6V0H0 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pagr1bF6V0H0 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pagr1bF6V0H0 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Pagr1bF6V0H0 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pagr1bF6V0H0 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC18.29■□□□□ 0.52
Pagr1bF6V0H0 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pagr1bF6V0H0 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC18.29■□□□□ 0.52
Pagr1bF6V0H0 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC18.29■□□□□ 0.52
Pagr1bF6V0H0 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.29■□□□□ 0.52
Pagr1bF6V0H0 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Pagr1bF6V0H0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Pagr1bF6V0H0 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pagr1bF6V0H0 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pagr1bF6V0H0 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pagr1bF6V0H0 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Pagr1bF6V0H0 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pagr1bF6V0H0 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pagr1bF6V0H0 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pagr1bF6V0H0 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pagr1bF6V0H0 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pagr1bF6V0H0 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pagr1bF6V0H0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pagr1bF6V0H0 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pagr1bF6V0H0 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.28■□□□□ 0.52
Pagr1bF6V0H0 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pagr1bF6V0H0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pagr1bF6V0H0 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pagr1bF6V0H0 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pagr1bF6V0H0 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Pagr1bF6V0H0 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pagr1bF6V0H0 Gm15358-201ENSMUST00000119249 520 ntBASIC18.28■□□□□ 0.52
Pagr1bF6V0H0 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC18.28■□□□□ 0.52
Pagr1bF6V0H0 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC18.28■□□□□ 0.52
Pagr1bF6V0H0 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pagr1bF6V0H0 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.28■□□□□ 0.52
Pagr1bF6V0H0 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pagr1bF6V0H0 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pagr1bF6V0H0 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC18.28■□□□□ 0.52
Pagr1bF6V0H0 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pagr1bF6V0H0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.28■□□□□ 0.52
Pagr1bF6V0H0 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.28■□□□□ 0.52
Pagr1bF6V0H0 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pagr1bF6V0H0 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pagr1bF6V0H0 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Pagr1bF6V0H0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Pagr1bF6V0H0 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pagr1bF6V0H0 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pagr1bF6V0H0 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms