Protein–RNA interactions for Protein: E9Q784

Zc3h13, Zinc finger CCCH domain-containing protein 13, mousemouse

Known RBP Predictions only

Length 1,729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h13E9Q784 Mir8102-201ENSMUST00000184148 139 ntBASIC21.76■■□□□ 1.07
Zc3h13E9Q784 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Zc3h13E9Q784 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Zc3h13E9Q784 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Zc3h13E9Q784 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Zc3h13E9Q784 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Zc3h13E9Q784 Wnt10b-206ENSMUST00000228546 2709 ntBASIC21.76■■□□□ 1.07
Zc3h13E9Q784 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Zc3h13E9Q784 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Zc3h13E9Q784 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Zc3h13E9Q784 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.75■■□□□ 1.07
Zc3h13E9Q784 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
Zc3h13E9Q784 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Zc3h13E9Q784 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Zc3h13E9Q784 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Zc3h13E9Q784 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Zc3h13E9Q784 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Zc3h13E9Q784 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Zc3h13E9Q784 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC21.75■■□□□ 1.07
Zc3h13E9Q784 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Zc3h13E9Q784 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Zc3h13E9Q784 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Zc3h13E9Q784 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Zc3h13E9Q784 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Zc3h13E9Q784 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Zc3h13E9Q784 Gm6018-201ENSMUST00000216090 1306 ntBASIC21.75■■□□□ 1.07
Zc3h13E9Q784 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Zc3h13E9Q784 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Zc3h13E9Q784 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Zc3h13E9Q784 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC21.75■■□□□ 1.07
Zc3h13E9Q784 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC21.75■■□□□ 1.07
Zc3h13E9Q784 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Zc3h13E9Q784 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Zc3h13E9Q784 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC21.75■■□□□ 1.07
Zc3h13E9Q784 CT025555.1-201ENSMUST00000225901 1217 ntBASIC21.75■■□□□ 1.07
Zc3h13E9Q784 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Zc3h13E9Q784 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Zc3h13E9Q784 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Zc3h13E9Q784 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Zc3h13E9Q784 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Zc3h13E9Q784 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Zc3h13E9Q784 Rbfox2-206ENSMUST00000227314 1810 ntBASIC21.74■■□□□ 1.07
Zc3h13E9Q784 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Zc3h13E9Q784 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Zc3h13E9Q784 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
Zc3h13E9Q784 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
Zc3h13E9Q784 Gm9794-201ENSMUST00000202370 423 ntBASIC21.74■■□□□ 1.07
Zc3h13E9Q784 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Zc3h13E9Q784 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Zc3h13E9Q784 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Zc3h13E9Q784 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Zc3h13E9Q784 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC21.73■■□□□ 1.07
Zc3h13E9Q784 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Zc3h13E9Q784 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Zc3h13E9Q784 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Zc3h13E9Q784 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Zc3h13E9Q784 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Zc3h13E9Q784 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Zc3h13E9Q784 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Zc3h13E9Q784 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Zc3h13E9Q784 Gm8318-201ENSMUST00000182954 872 ntBASIC21.73■■□□□ 1.07
Zc3h13E9Q784 Gm18187-201ENSMUST00000196476 984 ntBASIC21.73■■□□□ 1.07
Zc3h13E9Q784 Gm5779-201ENSMUST00000218467 910 ntBASIC21.73■■□□□ 1.07
Zc3h13E9Q784 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC21.73■■□□□ 1.07
Zc3h13E9Q784 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Zc3h13E9Q784 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Zc3h13E9Q784 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Zc3h13E9Q784 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC21.73■■□□□ 1.07
Zc3h13E9Q784 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Zc3h13E9Q784 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Zc3h13E9Q784 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Zc3h13E9Q784 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Zc3h13E9Q784 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Zc3h13E9Q784 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Zc3h13E9Q784 AC115863.1-201ENSMUST00000214815 1813 ntBASIC21.72■■□□□ 1.07
Zc3h13E9Q784 Gm11453-201ENSMUST00000117318 1007 ntBASIC21.72■■□□□ 1.07
Zc3h13E9Q784 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Zc3h13E9Q784 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Zc3h13E9Q784 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Zc3h13E9Q784 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Zc3h13E9Q784 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Zc3h13E9Q784 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Zc3h13E9Q784 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Zc3h13E9Q784 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Zc3h13E9Q784 Haglr-201ENSMUST00000100000 2085 ntBASIC21.72■■□□□ 1.07
Zc3h13E9Q784 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Zc3h13E9Q784 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Zc3h13E9Q784 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC21.72■■□□□ 1.07
Zc3h13E9Q784 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC21.72■■□□□ 1.07
Zc3h13E9Q784 Gm10154-201ENSMUST00000084445 354 ntBASIC21.72■■□□□ 1.07
Zc3h13E9Q784 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Zc3h13E9Q784 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Zc3h13E9Q784 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Zc3h13E9Q784 Gm37811-201ENSMUST00000192416 2601 ntBASIC21.71■■□□□ 1.07
Zc3h13E9Q784 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Zc3h13E9Q784 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Zc3h13E9Q784 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Zc3h13E9Q784 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Zc3h13E9Q784 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Zc3h13E9Q784 AC125350.2-201ENSMUST00000224737 727 ntBASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms