Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4lE9Q2N0 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC13.5□□□□□ -0.25
Cpsf4lE9Q2N0 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4lE9Q2N0 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4lE9Q2N0 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4lE9Q2N0 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4lE9Q2N0 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4lE9Q2N0 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4lE9Q2N0 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.5□□□□□ -0.25
Cpsf4lE9Q2N0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.5□□□□□ -0.25
Cpsf4lE9Q2N0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4lE9Q2N0 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4lE9Q2N0 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf4lE9Q2N0 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf4lE9Q2N0 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cpsf4lE9Q2N0 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf4lE9Q2N0 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf4lE9Q2N0 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.49□□□□□ -0.25
Cpsf4lE9Q2N0 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.49□□□□□ -0.25
Cpsf4lE9Q2N0 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf4lE9Q2N0 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf4lE9Q2N0 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.49□□□□□ -0.25
Cpsf4lE9Q2N0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.49□□□□□ -0.25
Cpsf4lE9Q2N0 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf4lE9Q2N0 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf4lE9Q2N0 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.49□□□□□ -0.25
Cpsf4lE9Q2N0 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf4lE9Q2N0 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf4lE9Q2N0 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Cpsf4lE9Q2N0 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Cpsf4lE9Q2N0 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf4lE9Q2N0 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.49□□□□□ -0.25
Cpsf4lE9Q2N0 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Cpsf4lE9Q2N0 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cpsf4lE9Q2N0 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf4lE9Q2N0 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf4lE9Q2N0 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf4lE9Q2N0 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf4lE9Q2N0 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cpsf4lE9Q2N0 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC13.48□□□□□ -0.25
Cpsf4lE9Q2N0 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.48□□□□□ -0.25
Cpsf4lE9Q2N0 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4lE9Q2N0 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
Cpsf4lE9Q2N0 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4lE9Q2N0 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4lE9Q2N0 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Cpsf4lE9Q2N0 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4lE9Q2N0 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4lE9Q2N0 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4lE9Q2N0 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4lE9Q2N0 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4lE9Q2N0 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cpsf4lE9Q2N0 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.48□□□□□ -0.25
Cpsf4lE9Q2N0 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.48□□□□□ -0.25
Cpsf4lE9Q2N0 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4lE9Q2N0 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.48□□□□□ -0.25
Cpsf4lE9Q2N0 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4lE9Q2N0 Gm25745-201ENSMUST00000174945 133 ntBASIC13.48□□□□□ -0.25
Cpsf4lE9Q2N0 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4lE9Q2N0 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Cpsf4lE9Q2N0 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Cpsf4lE9Q2N0 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4lE9Q2N0 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4lE9Q2N0 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4lE9Q2N0 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cpsf4lE9Q2N0 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.48□□□□□ -0.25
Cpsf4lE9Q2N0 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4lE9Q2N0 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4lE9Q2N0 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4lE9Q2N0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.48□□□□□ -0.25
Cpsf4lE9Q2N0 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4lE9Q2N0 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4lE9Q2N0 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4lE9Q2N0 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4lE9Q2N0 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Cpsf4lE9Q2N0 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf4lE9Q2N0 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Cpsf4lE9Q2N0 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf4lE9Q2N0 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf4lE9Q2N0 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf4lE9Q2N0 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Cpsf4lE9Q2N0 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf4lE9Q2N0 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf4lE9Q2N0 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cpsf4lE9Q2N0 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf4lE9Q2N0 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.47□□□□□ -0.25
Cpsf4lE9Q2N0 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf4lE9Q2N0 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf4lE9Q2N0 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.47□□□□□ -0.25
Cpsf4lE9Q2N0 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Cpsf4lE9Q2N0 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf4lE9Q2N0 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf4lE9Q2N0 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf4lE9Q2N0 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Cpsf4lE9Q2N0 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf4lE9Q2N0 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf4lE9Q2N0 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.47□□□□□ -0.25
Cpsf4lE9Q2N0 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf4lE9Q2N0 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf4lE9Q2N0 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms