Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh17E9PXF0 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh17E9PXF0 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh17E9PXF0 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh17E9PXF0 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh17E9PXF0 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh17E9PXF0 Gm25990-201ENSMUST00000102440 86 ntBASIC14.8□□□□□ -0.04
Pcdh17E9PXF0 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh17E9PXF0 Gm4535-201ENSMUST00000182274 558 ntBASIC14.8□□□□□ -0.04
Pcdh17E9PXF0 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.8□□□□□ -0.04
Pcdh17E9PXF0 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdh17E9PXF0 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.8□□□□□ -0.04
Pcdh17E9PXF0 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.8□□□□□ -0.04
Pcdh17E9PXF0 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.8□□□□□ -0.04
Pcdh17E9PXF0 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh17E9PXF0 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh17E9PXF0 Gm10355-201ENSMUST00000097146 517 ntBASIC14.8□□□□□ -0.04
Pcdh17E9PXF0 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.8□□□□□ -0.04
Pcdh17E9PXF0 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh17E9PXF0 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh17E9PXF0 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh17E9PXF0 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh17E9PXF0 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh17E9PXF0 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh17E9PXF0 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh17E9PXF0 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh17E9PXF0 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh17E9PXF0 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh17E9PXF0 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh17E9PXF0 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh17E9PXF0 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh17E9PXF0 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh17E9PXF0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh17E9PXF0 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh17E9PXF0 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh17E9PXF0 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh17E9PXF0 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Pcdh17E9PXF0 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh17E9PXF0 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh17E9PXF0 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh17E9PXF0 Gm13418-201ENSMUST00000119097 944 ntBASIC14.79□□□□□ -0.04
Pcdh17E9PXF0 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh17E9PXF0 Gm12350-201ENSMUST00000121208 462 ntBASIC14.79□□□□□ -0.04
Pcdh17E9PXF0 Gm1401-201ENSMUST00000122048 772 ntBASIC14.79□□□□□ -0.04
Pcdh17E9PXF0 Gm12497-201ENSMUST00000138778 237 ntBASIC14.79□□□□□ -0.04
Pcdh17E9PXF0 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh17E9PXF0 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdh17E9PXF0 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh17E9PXF0 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh17E9PXF0 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdh17E9PXF0 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdh17E9PXF0 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh17E9PXF0 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh17E9PXF0 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Pcdh17E9PXF0 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh17E9PXF0 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Pcdh17E9PXF0 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh17E9PXF0 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh17E9PXF0 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Pcdh17E9PXF0 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh17E9PXF0 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh17E9PXF0 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Pcdh17E9PXF0 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh17E9PXF0 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh17E9PXF0 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pcdh17E9PXF0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pcdh17E9PXF0 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
Pcdh17E9PXF0 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh17E9PXF0 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh17E9PXF0 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh17E9PXF0 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh17E9PXF0 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.78□□□□□ -0.04
Pcdh17E9PXF0 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.78□□□□□ -0.04
Pcdh17E9PXF0 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh17E9PXF0 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Pcdh17E9PXF0 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh17E9PXF0 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh17E9PXF0 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Pcdh17E9PXF0 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh17E9PXF0 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh17E9PXF0 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdh17E9PXF0 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Pcdh17E9PXF0 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh17E9PXF0 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh17E9PXF0 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh17E9PXF0 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh17E9PXF0 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh17E9PXF0 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh17E9PXF0 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh17E9PXF0 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh17E9PXF0 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh17E9PXF0 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Pcdh17E9PXF0 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh17E9PXF0 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh17E9PXF0 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.77□□□□□ -0.04
Pcdh17E9PXF0 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.77□□□□□ -0.04
Pcdh17E9PXF0 Gm4459-201ENSMUST00000118750 468 ntBASIC14.77□□□□□ -0.05
Pcdh17E9PXF0 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Pcdh17E9PXF0 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Pcdh17E9PXF0 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms