Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Shank1D3YZU1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shank1D3YZU1 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Shank1D3YZU1 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shank1D3YZU1 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shank1D3YZU1 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Shank1D3YZU1 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shank1D3YZU1 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shank1D3YZU1 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shank1D3YZU1 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shank1D3YZU1 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shank1D3YZU1 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Shank1D3YZU1 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.23□□□□□ -0.13
Shank1D3YZU1 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Shank1D3YZU1 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Shank1D3YZU1 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.23□□□□□ -0.13
Shank1D3YZU1 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.23□□□□□ -0.13
Shank1D3YZU1 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Shank1D3YZU1 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shank1D3YZU1 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Shank1D3YZU1 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shank1D3YZU1 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shank1D3YZU1 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Shank1D3YZU1 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shank1D3YZU1 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.22□□□□□ -0.13
Shank1D3YZU1 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shank1D3YZU1 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shank1D3YZU1 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.22□□□□□ -0.13
Shank1D3YZU1 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Shank1D3YZU1 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Shank1D3YZU1 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shank1D3YZU1 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Shank1D3YZU1 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Shank1D3YZU1 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.22□□□□□ -0.13
Shank1D3YZU1 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Shank1D3YZU1 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.22□□□□□ -0.13
Shank1D3YZU1 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.22□□□□□ -0.13
Shank1D3YZU1 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shank1D3YZU1 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shank1D3YZU1 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.22□□□□□ -0.13
Shank1D3YZU1 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shank1D3YZU1 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shank1D3YZU1 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shank1D3YZU1 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shank1D3YZU1 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shank1D3YZU1 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shank1D3YZU1 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shank1D3YZU1 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shank1D3YZU1 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shank1D3YZU1 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.22□□□□□ -0.13
Shank1D3YZU1 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shank1D3YZU1 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shank1D3YZU1 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shank1D3YZU1 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.22□□□□□ -0.13
Shank1D3YZU1 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Shank1D3YZU1 Gm36967-201ENSMUST00000193814 266 ntBASIC14.22□□□□□ -0.13
Shank1D3YZU1 Gm45167-201ENSMUST00000208007 322 ntBASIC14.22□□□□□ -0.13
Shank1D3YZU1 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.22□□□□□ -0.13
Shank1D3YZU1 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.22□□□□□ -0.13
Shank1D3YZU1 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.22□□□□□ -0.13
Shank1D3YZU1 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shank1D3YZU1 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Shank1D3YZU1 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Shank1D3YZU1 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shank1D3YZU1 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shank1D3YZU1 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Shank1D3YZU1 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Shank1D3YZU1 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shank1D3YZU1 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shank1D3YZU1 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shank1D3YZU1 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shank1D3YZU1 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shank1D3YZU1 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.21□□□□□ -0.13
Shank1D3YZU1 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shank1D3YZU1 Mir6404-201ENSMUST00000183699 94 ntBASIC14.21□□□□□ -0.13
Shank1D3YZU1 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.21□□□□□ -0.13
Shank1D3YZU1 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shank1D3YZU1 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shank1D3YZU1 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.21□□□□□ -0.13
Shank1D3YZU1 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shank1D3YZU1 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Shank1D3YZU1 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.21□□□□□ -0.14
Shank1D3YZU1 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Shank1D3YZU1 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Shank1D3YZU1 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Shank1D3YZU1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.21□□□□□ -0.14
Shank1D3YZU1 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Shank1D3YZU1 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.2□□□□□ -0.14
Shank1D3YZU1 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.2□□□□□ -0.14
Shank1D3YZU1 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shank1D3YZU1 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Shank1D3YZU1 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Shank1D3YZU1 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.2□□□□□ -0.14
Shank1D3YZU1 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.2□□□□□ -0.14
Shank1D3YZU1 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.2□□□□□ -0.14
Shank1D3YZU1 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shank1D3YZU1 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Shank1D3YZU1 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shank1D3YZU1 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.2□□□□□ -0.14
Shank1D3YZU1 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms