Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn7aB1AYL1 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn7aB1AYL1 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn7aB1AYL1 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC20.41■□□□□ 0.86
Scn7aB1AYL1 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Scn7aB1AYL1 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn7aB1AYL1 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Scn7aB1AYL1 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Scn7aB1AYL1 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Scn7aB1AYL1 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Scn7aB1AYL1 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn7aB1AYL1 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn7aB1AYL1 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn7aB1AYL1 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Scn7aB1AYL1 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn7aB1AYL1 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn7aB1AYL1 Gm26596-201ENSMUST00000180464 2655 ntBASIC20.4■□□□□ 0.86
Scn7aB1AYL1 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn7aB1AYL1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn7aB1AYL1 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn7aB1AYL1 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn7aB1AYL1 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn7aB1AYL1 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn7aB1AYL1 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC20.4■□□□□ 0.86
Scn7aB1AYL1 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn7aB1AYL1 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn7aB1AYL1 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
Scn7aB1AYL1 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn7aB1AYL1 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn7aB1AYL1 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn7aB1AYL1 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn7aB1AYL1 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn7aB1AYL1 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Scn7aB1AYL1 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Scn7aB1AYL1 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Scn7aB1AYL1 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Scn7aB1AYL1 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC20.39■□□□□ 0.86
Scn7aB1AYL1 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Scn7aB1AYL1 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC20.39■□□□□ 0.86
Scn7aB1AYL1 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Scn7aB1AYL1 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC20.39■□□□□ 0.86
Scn7aB1AYL1 AC154767.3-201ENSMUST00000225150 1342 ntBASIC20.39■□□□□ 0.85
Scn7aB1AYL1 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scn7aB1AYL1 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scn7aB1AYL1 AC130669.1-201ENSMUST00000228537 1672 ntBASIC20.39■□□□□ 0.85
Scn7aB1AYL1 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scn7aB1AYL1 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC20.39■□□□□ 0.85
Scn7aB1AYL1 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scn7aB1AYL1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scn7aB1AYL1 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Scn7aB1AYL1 Gm18889-201ENSMUST00000174284 929 ntBASIC20.38■□□□□ 0.85
Scn7aB1AYL1 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scn7aB1AYL1 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Scn7aB1AYL1 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scn7aB1AYL1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scn7aB1AYL1 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Scn7aB1AYL1 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Scn7aB1AYL1 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Scn7aB1AYL1 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scn7aB1AYL1 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scn7aB1AYL1 Nudt18-203ENSMUST00000228768 1578 ntBASIC20.38■□□□□ 0.85
Scn7aB1AYL1 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scn7aB1AYL1 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scn7aB1AYL1 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
Scn7aB1AYL1 CT025555.1-201ENSMUST00000225901 1217 ntBASIC20.38■□□□□ 0.85
Scn7aB1AYL1 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scn7aB1AYL1 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scn7aB1AYL1 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scn7aB1AYL1 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scn7aB1AYL1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Scn7aB1AYL1 AC126250.1-201ENSMUST00000228343 1768 ntBASIC20.37■□□□□ 0.85
Scn7aB1AYL1 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scn7aB1AYL1 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Scn7aB1AYL1 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Scn7aB1AYL1 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC20.37■□□□□ 0.85
Scn7aB1AYL1 Gpr146-202ENSMUST00000053120 1040 ntBASIC20.37■□□□□ 0.85
Scn7aB1AYL1 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scn7aB1AYL1 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scn7aB1AYL1 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
Scn7aB1AYL1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
Scn7aB1AYL1 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Scn7aB1AYL1 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scn7aB1AYL1 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scn7aB1AYL1 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scn7aB1AYL1 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC20.36■□□□□ 0.85
Scn7aB1AYL1 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
Scn7aB1AYL1 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC20.36■□□□□ 0.85
Scn7aB1AYL1 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Scn7aB1AYL1 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC20.36■□□□□ 0.85
Scn7aB1AYL1 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC20.36■□□□□ 0.85
Scn7aB1AYL1 Gm10154-201ENSMUST00000084445 354 ntBASIC20.36■□□□□ 0.85
Scn7aB1AYL1 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scn7aB1AYL1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Scn7aB1AYL1 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scn7aB1AYL1 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Scn7aB1AYL1 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scn7aB1AYL1 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC20.35■□□□□ 0.85
Scn7aB1AYL1 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC20.35■□□□□ 0.85
Scn7aB1AYL1 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC20.35■□□□□ 0.85
Scn7aB1AYL1 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms