Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gm11127A7VMS2 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm11127A7VMS2 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Gm11127A7VMS2 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm11127A7VMS2 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm11127A7VMS2 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm11127A7VMS2 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm11127A7VMS2 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm11127A7VMS2 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm11127A7VMS2 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Gm11127A7VMS2 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm11127A7VMS2 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm11127A7VMS2 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm11127A7VMS2 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm11127A7VMS2 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm11127A7VMS2 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Gm11127A7VMS2 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm11127A7VMS2 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm11127A7VMS2 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm11127A7VMS2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm11127A7VMS2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm11127A7VMS2 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm11127A7VMS2 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.14□□□□□ -0.15
Gm11127A7VMS2 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm11127A7VMS2 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm11127A7VMS2 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.14□□□□□ -0.15
Gm11127A7VMS2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm11127A7VMS2 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm11127A7VMS2 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm11127A7VMS2 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.14□□□□□ -0.15
Gm11127A7VMS2 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.14□□□□□ -0.15
Gm11127A7VMS2 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm11127A7VMS2 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm11127A7VMS2 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm11127A7VMS2 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm11127A7VMS2 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.13□□□□□ -0.15
Gm11127A7VMS2 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm11127A7VMS2 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm11127A7VMS2 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm11127A7VMS2 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Gm11127A7VMS2 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gm11127A7VMS2 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.13□□□□□ -0.15
Gm11127A7VMS2 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Gm11127A7VMS2 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm11127A7VMS2 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm11127A7VMS2 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gm11127A7VMS2 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm11127A7VMS2 Gm3375-201ENSMUST00000203929 796 ntBASIC14.13□□□□□ -0.15
Gm11127A7VMS2 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Gm11127A7VMS2 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.13□□□□□ -0.15
Gm11127A7VMS2 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm11127A7VMS2 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gm11127A7VMS2 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm11127A7VMS2 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm11127A7VMS2 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm11127A7VMS2 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm11127A7VMS2 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm11127A7VMS2 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm11127A7VMS2 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Gm11127A7VMS2 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.13□□□□□ -0.15
Gm11127A7VMS2 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gm11127A7VMS2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm11127A7VMS2 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm11127A7VMS2 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm11127A7VMS2 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm11127A7VMS2 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm11127A7VMS2 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm11127A7VMS2 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Gm11127A7VMS2 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm11127A7VMS2 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm11127A7VMS2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm11127A7VMS2 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm11127A7VMS2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm11127A7VMS2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm11127A7VMS2 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm11127A7VMS2 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm11127A7VMS2 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.12□□□□□ -0.15
Gm11127A7VMS2 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm11127A7VMS2 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm11127A7VMS2 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm11127A7VMS2 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.12□□□□□ -0.15
Gm11127A7VMS2 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.12□□□□□ -0.15
Gm11127A7VMS2 Odf3b-204ENSMUST00000227834 930 ntBASIC14.12□□□□□ -0.15
Gm11127A7VMS2 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm11127A7VMS2 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm11127A7VMS2 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm11127A7VMS2 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gm11127A7VMS2 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm11127A7VMS2 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm11127A7VMS2 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm11127A7VMS2 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gm11127A7VMS2 App-207ENSMUST00000227737 2827 ntBASIC14.12□□□□□ -0.15
Gm11127A7VMS2 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm11127A7VMS2 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Gm11127A7VMS2 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm11127A7VMS2 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.12□□□□□ -0.15
Gm11127A7VMS2 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm11127A7VMS2 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm11127A7VMS2 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm11127A7VMS2 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms