Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm5640A3KG49 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.22■□□□□ 0.19
Gm5640A3KG49 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm5640A3KG49 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Gm5640A3KG49 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Gm5640A3KG49 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Gm5640A3KG49 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.22■□□□□ 0.19
Gm5640A3KG49 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm5640A3KG49 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.22■□□□□ 0.19
Gm5640A3KG49 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm5640A3KG49 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Gm5640A3KG49 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Gm5640A3KG49 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Gm5640A3KG49 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Gm5640A3KG49 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm5640A3KG49 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm5640A3KG49 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm5640A3KG49 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Gm5640A3KG49 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm5640A3KG49 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.21■□□□□ 0.19
Gm5640A3KG49 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm5640A3KG49 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm5640A3KG49 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm5640A3KG49 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm5640A3KG49 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm5640A3KG49 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Gm5640A3KG49 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.21■□□□□ 0.19
Gm5640A3KG49 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm5640A3KG49 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm5640A3KG49 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm5640A3KG49 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Gm5640A3KG49 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm5640A3KG49 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm5640A3KG49 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm5640A3KG49 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm5640A3KG49 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm5640A3KG49 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Gm5640A3KG49 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Gm5640A3KG49 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.21■□□□□ 0.18
Gm5640A3KG49 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Gm5640A3KG49 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Gm5640A3KG49 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Gm5640A3KG49 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Gm5640A3KG49 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.21■□□□□ 0.18
Gm5640A3KG49 BC037039-201ENSMUST00000192003 2205 ntBASIC16.21■□□□□ 0.18
Gm5640A3KG49 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.21■□□□□ 0.18
Gm5640A3KG49 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm5640A3KG49 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Gm5640A3KG49 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gm5640A3KG49 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm5640A3KG49 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gm5640A3KG49 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm5640A3KG49 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm5640A3KG49 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm5640A3KG49 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Gm5640A3KG49 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.2■□□□□ 0.18
Gm5640A3KG49 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gm5640A3KG49 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gm5640A3KG49 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Gm5640A3KG49 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.2■□□□□ 0.18
Gm5640A3KG49 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.2■□□□□ 0.18
Gm5640A3KG49 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm5640A3KG49 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Gm5640A3KG49 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.2■□□□□ 0.18
Gm5640A3KG49 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm5640A3KG49 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm5640A3KG49 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm5640A3KG49 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.2■□□□□ 0.18
Gm5640A3KG49 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.2■□□□□ 0.18
Gm5640A3KG49 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm5640A3KG49 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Gm5640A3KG49 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm5640A3KG49 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm5640A3KG49 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gm5640A3KG49 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm5640A3KG49 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm5640A3KG49 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm5640A3KG49 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gm5640A3KG49 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm5640A3KG49 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
Gm5640A3KG49 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Gm5640A3KG49 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gm5640A3KG49 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm5640A3KG49 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm5640A3KG49 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Gm5640A3KG49 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Gm5640A3KG49 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm5640A3KG49 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.19■□□□□ 0.18
Gm5640A3KG49 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm5640A3KG49 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.19■□□□□ 0.18
Gm5640A3KG49 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gm5640A3KG49 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.19■□□□□ 0.18
Gm5640A3KG49 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gm5640A3KG49 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm5640A3KG49 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm5640A3KG49 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm5640A3KG49 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm5640A3KG49 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Gm5640A3KG49 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Gm5640A3KG49 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms