Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Gm3880A0A1B0GSB3 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Gm3880A0A1B0GSB3 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
Gm3880A0A1B0GSB3 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Gm3880A0A1B0GSB3 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Gm3880A0A1B0GSB3 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
Gm3880A0A1B0GSB3 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Gm3880A0A1B0GSB3 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Gm3880A0A1B0GSB3 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Gm3880A0A1B0GSB3 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Gm10167-201ENSMUST00000150411 1479 ntBASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Wnt10b-204ENSMUST00000226655 1807 ntBASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Gm3880A0A1B0GSB3 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 Acot6-202ENSMUST00000222921 3622 ntBASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Gm3880A0A1B0GSB3 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms