Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cfap99A0A140LIX9 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cfap99A0A140LIX9 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cfap99A0A140LIX9 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cfap99A0A140LIX9 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cfap99A0A140LIX9 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cfap99A0A140LIX9 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
Cfap99A0A140LIX9 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC19.03■□□□□ 0.64
Cfap99A0A140LIX9 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cfap99A0A140LIX9 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cfap99A0A140LIX9 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cfap99A0A140LIX9 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cfap99A0A140LIX9 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cfap99A0A140LIX9 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cfap99A0A140LIX9 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.03■□□□□ 0.64
Cfap99A0A140LIX9 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cfap99A0A140LIX9 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cfap99A0A140LIX9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.03■□□□□ 0.64
Cfap99A0A140LIX9 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cfap99A0A140LIX9 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cfap99A0A140LIX9 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Cfap99A0A140LIX9 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cfap99A0A140LIX9 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Cfap99A0A140LIX9 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cfap99A0A140LIX9 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cfap99A0A140LIX9 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC19.02■□□□□ 0.64
Cfap99A0A140LIX9 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cfap99A0A140LIX9 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC19.02■□□□□ 0.64
Cfap99A0A140LIX9 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cfap99A0A140LIX9 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cfap99A0A140LIX9 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cfap99A0A140LIX9 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cfap99A0A140LIX9 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cfap99A0A140LIX9 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Cfap99A0A140LIX9 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cfap99A0A140LIX9 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cfap99A0A140LIX9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cfap99A0A140LIX9 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cfap99A0A140LIX9 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cfap99A0A140LIX9 Gm2213-201ENSMUST00000197485 688 ntBASIC19.01■□□□□ 0.63
Cfap99A0A140LIX9 Gm5364-201ENSMUST00000216789 889 ntBASIC19.01■□□□□ 0.63
Cfap99A0A140LIX9 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cfap99A0A140LIX9 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cfap99A0A140LIX9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cfap99A0A140LIX9 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.01■□□□□ 0.63
Cfap99A0A140LIX9 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cfap99A0A140LIX9 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cfap99A0A140LIX9 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Cfap99A0A140LIX9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cfap99A0A140LIX9 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cfap99A0A140LIX9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Cfap99A0A140LIX9 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC19■□□□□ 0.63
Cfap99A0A140LIX9 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
Cfap99A0A140LIX9 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cfap99A0A140LIX9 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cfap99A0A140LIX9 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cfap99A0A140LIX9 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cfap99A0A140LIX9 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC19■□□□□ 0.63
Cfap99A0A140LIX9 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC19■□□□□ 0.63
Cfap99A0A140LIX9 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
Cfap99A0A140LIX9 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cfap99A0A140LIX9 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Cfap99A0A140LIX9 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC19■□□□□ 0.63
Cfap99A0A140LIX9 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cfap99A0A140LIX9 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cfap99A0A140LIX9 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19■□□□□ 0.63
Cfap99A0A140LIX9 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cfap99A0A140LIX9 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cfap99A0A140LIX9 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Cfap99A0A140LIX9 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Cfap99A0A140LIX9 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cfap99A0A140LIX9 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cfap99A0A140LIX9 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Cfap99A0A140LIX9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cfap99A0A140LIX9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cfap99A0A140LIX9 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cfap99A0A140LIX9 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cfap99A0A140LIX9 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cfap99A0A140LIX9 Gm25745-201ENSMUST00000174945 133 ntBASIC18.99■□□□□ 0.63
Cfap99A0A140LIX9 Mir5126-201ENSMUST00000175513 77 ntBASIC18.99■□□□□ 0.63
Cfap99A0A140LIX9 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cfap99A0A140LIX9 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cfap99A0A140LIX9 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cfap99A0A140LIX9 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cfap99A0A140LIX9 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cfap99A0A140LIX9 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cfap99A0A140LIX9 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cfap99A0A140LIX9 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cfap99A0A140LIX9 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cfap99A0A140LIX9 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cfap99A0A140LIX9 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cfap99A0A140LIX9 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cfap99A0A140LIX9 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cfap99A0A140LIX9 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.99■□□□□ 0.63
Cfap99A0A140LIX9 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cfap99A0A140LIX9 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cfap99A0A140LIX9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cfap99A0A140LIX9 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cfap99A0A140LIX9 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cfap99A0A140LIX9 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms