Protein–RNA interactions for Protein: A0A0U1RP99

Ino80e, INO80 complex subunit E (Fragment), mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ino80eA0A0U1RP99 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ino80eA0A0U1RP99 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.19□□□□□ -0.3
Ino80eA0A0U1RP99 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ino80eA0A0U1RP99 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Ino80eA0A0U1RP99 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Ino80eA0A0U1RP99 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ino80eA0A0U1RP99 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ino80eA0A0U1RP99 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ino80eA0A0U1RP99 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ino80eA0A0U1RP99 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ino80eA0A0U1RP99 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ino80eA0A0U1RP99 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ino80eA0A0U1RP99 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ino80eA0A0U1RP99 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Ino80eA0A0U1RP99 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.18□□□□□ -0.3
Ino80eA0A0U1RP99 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC13.18□□□□□ -0.3
Ino80eA0A0U1RP99 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ino80eA0A0U1RP99 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC13.18□□□□□ -0.3
Ino80eA0A0U1RP99 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC13.18□□□□□ -0.3
Ino80eA0A0U1RP99 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ino80eA0A0U1RP99 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ino80eA0A0U1RP99 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ino80eA0A0U1RP99 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ino80eA0A0U1RP99 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ino80eA0A0U1RP99 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ino80eA0A0U1RP99 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ino80eA0A0U1RP99 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ino80eA0A0U1RP99 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ino80eA0A0U1RP99 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ino80eA0A0U1RP99 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ino80eA0A0U1RP99 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ino80eA0A0U1RP99 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ino80eA0A0U1RP99 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC13.17□□□□□ -0.3
Ino80eA0A0U1RP99 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ino80eA0A0U1RP99 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ino80eA0A0U1RP99 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ino80eA0A0U1RP99 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ino80eA0A0U1RP99 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
Ino80eA0A0U1RP99 Gm27801-201ENSMUST00000184174 223 ntBASIC13.17□□□□□ -0.3
Ino80eA0A0U1RP99 AC137127.1-201ENSMUST00000213466 1078 ntBASIC13.17□□□□□ -0.3
Ino80eA0A0U1RP99 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ino80eA0A0U1RP99 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ino80eA0A0U1RP99 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ino80eA0A0U1RP99 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ino80eA0A0U1RP99 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
Ino80eA0A0U1RP99 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ino80eA0A0U1RP99 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ino80eA0A0U1RP99 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ino80eA0A0U1RP99 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ino80eA0A0U1RP99 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ino80eA0A0U1RP99 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Ino80eA0A0U1RP99 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ino80eA0A0U1RP99 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ino80eA0A0U1RP99 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ino80eA0A0U1RP99 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ino80eA0A0U1RP99 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ino80eA0A0U1RP99 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ino80eA0A0U1RP99 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ino80eA0A0U1RP99 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ino80eA0A0U1RP99 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ino80eA0A0U1RP99 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.16□□□□□ -0.3
Ino80eA0A0U1RP99 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ino80eA0A0U1RP99 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.16□□□□□ -0.3
Ino80eA0A0U1RP99 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ino80eA0A0U1RP99 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ino80eA0A0U1RP99 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ino80eA0A0U1RP99 Gm43060-201ENSMUST00000200621 289 ntBASIC13.16□□□□□ -0.3
Ino80eA0A0U1RP99 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Ino80eA0A0U1RP99 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ino80eA0A0U1RP99 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ino80eA0A0U1RP99 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ino80eA0A0U1RP99 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ino80eA0A0U1RP99 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ino80eA0A0U1RP99 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ino80eA0A0U1RP99 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ino80eA0A0U1RP99 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ino80eA0A0U1RP99 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ino80eA0A0U1RP99 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ino80eA0A0U1RP99 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ino80eA0A0U1RP99 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ino80eA0A0U1RP99 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ino80eA0A0U1RP99 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ino80eA0A0U1RP99 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ino80eA0A0U1RP99 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ino80eA0A0U1RP99 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ino80eA0A0U1RP99 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ino80eA0A0U1RP99 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ino80eA0A0U1RP99 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC13.15□□□□□ -0.3
Ino80eA0A0U1RP99 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ino80eA0A0U1RP99 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ino80eA0A0U1RP99 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ino80eA0A0U1RP99 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ino80eA0A0U1RP99 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ino80eA0A0U1RP99 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ino80eA0A0U1RP99 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ino80eA0A0U1RP99 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ino80eA0A0U1RP99 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ino80eA0A0U1RP99 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ino80eA0A0U1RP99 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ino80eA0A0U1RP99 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms